Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 KRT18P64-201ENST00000434946 1219 ntBASIC9.98□□□□□ -0.81
SCXQ7RTU7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 PHKG1P2-201ENST00000457537 863 ntBASIC9.98□□□□□ -0.81
SCXQ7RTU7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 USP32P1-208ENST00000506594 1164 ntBASIC9.98□□□□□ -0.81
SCXQ7RTU7 AC104989.1-201ENST00000519711 778 ntBASIC9.98□□□□□ -0.81
SCXQ7RTU7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 TDH-203ENST00000531764 1110 ntBASIC9.98□□□□□ -0.81
SCXQ7RTU7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 HNRNPUP1-201ENST00000554987 333 ntBASIC9.98□□□□□ -0.81
SCXQ7RTU7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 AL359711.2-201ENST00000563105 872 ntBASIC9.98□□□□□ -0.81
SCXQ7RTU7 MIR5189-201ENST00000577370 114 ntBASIC9.98□□□□□ -0.81
SCXQ7RTU7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 BTNL10-201ENST00000595971 695 ntBASIC9.98□□□□□ -0.81
SCXQ7RTU7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 ABBA01031660.1-201ENST00000635219 756 ntBASIC9.98□□□□□ -0.81
SCXQ7RTU7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 COX11-210ENST00000639671 696 ntBASIC9.98□□□□□ -0.81
SCXQ7RTU7 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
SCXQ7RTU7 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SCXQ7RTU7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 POR-201ENST00000394893 2532 ntTSL 5 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 SOCS2P1-201ENST00000417727 557 ntBASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms