Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.13■□□□□ 0.33
USP50Q70EL3 GRPEL2P1-201ENST00000453145 339 ntBASIC17.13■□□□□ 0.33
USP50Q70EL3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.13■□□□□ 0.33
USP50Q70EL3 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC17.13■□□□□ 0.33
USP50Q70EL3 VENTXP3-201ENST00000546480 773 ntBASIC17.13■□□□□ 0.33
USP50Q70EL3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.13■□□□□ 0.33
USP50Q70EL3 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
USP50Q70EL3 AC145285.5-201ENST00000562217 361 ntBASIC17.13■□□□□ 0.33
USP50Q70EL3 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.13■□□□□ 0.33
USP50Q70EL3 AP005264.5-201ENST00000590066 467 ntBASIC17.13■□□□□ 0.33
USP50Q70EL3 AL359091.4-201ENST00000610052 409 ntBASIC17.13■□□□□ 0.33
USP50Q70EL3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.13■□□□□ 0.33
USP50Q70EL3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.13■□□□□ 0.33
USP50Q70EL3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.13■□□□□ 0.33
USP50Q70EL3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
USP50Q70EL3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
USP50Q70EL3 AP005117.1-202ENST00000581724 1908 ntBASIC17.13■□□□□ 0.33
USP50Q70EL3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
USP50Q70EL3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.13■□□□□ 0.33
USP50Q70EL3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.13■□□□□ 0.33
USP50Q70EL3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.13■□□□□ 0.33
USP50Q70EL3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.13■□□□□ 0.33
USP50Q70EL3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
USP50Q70EL3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP50Q70EL3 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.12■□□□□ 0.33
USP50Q70EL3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.12■□□□□ 0.33
USP50Q70EL3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.12■□□□□ 0.33
USP50Q70EL3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.12■□□□□ 0.33
USP50Q70EL3 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 AC004522.1-201ENST00000419978 654 ntBASIC17.12■□□□□ 0.33
USP50Q70EL3 RNLS-203ENST00000437752 525 ntTSL 2 BASIC17.12■□□□□ 0.33
USP50Q70EL3 ASS1P2-201ENST00000439895 1223 ntBASIC17.12■□□□□ 0.33
USP50Q70EL3 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
USP50Q70EL3 RN7SL375P-201ENST00000492442 298 ntBASIC17.12■□□□□ 0.33
USP50Q70EL3 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.12■□□□□ 0.33
USP50Q70EL3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.12■□□□□ 0.33
USP50Q70EL3 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
USP50Q70EL3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.12■□□□□ 0.33
USP50Q70EL3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.12■□□□□ 0.33
USP50Q70EL3 AC092850.2-201ENST00000623821 2697 ntBASIC17.12■□□□□ 0.33
USP50Q70EL3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP50Q70EL3 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
USP50Q70EL3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
USP50Q70EL3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.11■□□□□ 0.33
USP50Q70EL3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 KHSRPP1-201ENST00000427983 1768 ntBASIC17.11■□□□□ 0.33
USP50Q70EL3 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.11■□□□□ 0.33
USP50Q70EL3 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
USP50Q70EL3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 LINC00265-2P-201ENST00000413372 782 ntBASIC17.11■□□□□ 0.33
USP50Q70EL3 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC17.11■□□□□ 0.33
USP50Q70EL3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC17.11■□□□□ 0.33
USP50Q70EL3 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.11■□□□□ 0.33
USP50Q70EL3 KNOP1P1-201ENST00000542108 989 ntBASIC17.11■□□□□ 0.33
USP50Q70EL3 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC17.11■□□□□ 0.33
USP50Q70EL3 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC17.11■□□□□ 0.33
USP50Q70EL3 AC004686.1-201ENST00000605113 538 ntBASIC17.11■□□□□ 0.33
USP50Q70EL3 AL021707.6-201ENST00000609212 491 ntBASIC17.11■□□□□ 0.33
USP50Q70EL3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms