Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 AC007292.2-201ENST00000593524 1812 ntBASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 AL596276.2-201ENST00000447525 331 ntBASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 AC134698.3-201ENST00000523880 214 ntBASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 FGFR3P5-201ENST00000564496 886 ntBASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 RN7SL190P-201ENST00000582519 257 ntBASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 MIR6720-201ENST00000611664 98 ntBASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 AC027601.3-201ENST00000622907 509 ntBASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 AC126177.1-201ENST00000547829 2218 ntBASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 AL157407.1-201ENST00000435784 904 ntBASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 AC005962.1-201ENST00000584100 773 ntBASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 AC008805.1-201ENST00000590892 364 ntBASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 AC136759.1-202ENST00000530858 2194 ntBASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 AC144831.1-201ENST00000573312 2656 ntBASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC62Q6P9F0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms