Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 BCYRN1-201ENST00000418539 200 ntBASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 AC005730.2-201ENST00000564549 1184 ntBASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 MIR4783-201ENST00000580343 82 ntBASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 AC022748.3-201ENST00000621828 275 ntBASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 KRT8P29-201ENST00000420409 1371 ntBASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 SHC1P1-201ENST00000425230 1745 ntBASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
H3F3CQ6NXT2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
H3F3CQ6NXT2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
H3F3CQ6NXT2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
H3F3CQ6NXT2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
H3F3CQ6NXT2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
H3F3CQ6NXT2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.77□□□□□ -0.2
H3F3CQ6NXT2 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 TUBB8P8-201ENST00000458717 1058 ntBASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 DUX4L46-201ENST00000566845 751 ntBASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 AC005324.6-201ENST00000587972 613 ntBASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 AC020914.3-201ENST00000594712 304 ntBASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 AC009955.4-201ENST00000597192 544 ntBASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3CQ6NXT2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms