Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AC090502.4-201ENST00000551714 1386 ntBASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 WASH3P-207ENST00000560956 1394 ntBASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AL136172.1-201ENST00000598590 1394 ntBASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD4Q5XG99 AC023024.2-201ENST00000623561 1993 ntBASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 MRPL37P1-201ENST00000592451 1337 ntBASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 AC004837.1-201ENST00000446267 564 ntBASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 AC138701.2-201ENST00000553634 226 ntBASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC14.43□□□□□ -0.1
LYSMD4Q5XG99 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 AC020658.6-201ENST00000623564 1870 ntBASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 KRT17P5-201ENST00000332088 839 ntBASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 AP000322.3-201ENST00000608665 388 ntBASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 MROH4P-201ENST00000431302 1578 ntBASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD4Q5XG99 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms