Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 TERF1P3-201ENST00000505638 1227 ntBASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATPAF1Q5TC12 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 DKFZP434A062-201ENST00000573103 5021 ntBASIC13□□□□□ -0.33
ATPAF1Q5TC12 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 CLK3P2-201ENST00000427566 1453 ntBASIC13□□□□□ -0.33
ATPAF1Q5TC12 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 AC007541.1-201ENST00000570282 1469 ntBASIC13□□□□□ -0.33
ATPAF1Q5TC12 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms