Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 HERC2P11-201ENST00000562845 725 ntBASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 AC100756.2-201ENST00000569537 736 ntBASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPHKAPQ2M3C7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 BUD31-205ENST00000456893 512 ntTSL 5 BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHKAPQ2M3C7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 POR-201ENST00000394893 2532 ntTSL 5 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 AC108734.2-201ENST00000420887 1069 ntBASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 AC025183.3-201ENST00000623526 1482 ntBASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 RN7SL357P-201ENST00000581065 298 ntBASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SPHKAPQ2M3C7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 BAX-205ENST00000391871 687 ntTSL 5 BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 AC006987.1-201ENST00000413610 527 ntBASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 AL021707.6-201ENST00000609212 491 ntBASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC20.72■□□□□ 0.91
SPHKAPQ2M3C7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms