Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH1Q08174 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH1Q08174 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDH1Q08174 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDH1Q08174 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDH1Q08174 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDH1Q08174 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDH1Q08174 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDH1Q08174 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PCDH1Q08174 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
PCDH1Q08174 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH1Q08174 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH1Q08174 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PCDH1Q08174 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
PCDH1Q08174 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDH1Q08174 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH1Q08174 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PCDH1Q08174 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDH1Q08174 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDH1Q08174 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCDH1Q08174 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PCDH1Q08174 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PCDH1Q08174 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
PCDH1Q08174 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PCDH1Q08174 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDH1Q08174 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDH1Q08174 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDH1Q08174 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDH1Q08174 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.36□□□□□ -0.11
PCDH1Q08174 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 AC103988.2-201ENST00000561804 725 ntBASIC14.36□□□□□ -0.11
PCDH1Q08174 AL596325.1-201ENST00000563991 1082 ntBASIC14.36□□□□□ -0.11
PCDH1Q08174 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDH1Q08174 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDH1Q08174 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCDH1Q08174 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
PCDH1Q08174 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDH1Q08174 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.36□□□□□ -0.11
PCDH1Q08174 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDH1Q08174 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 MYADML-201ENST00000474610 2147 ntBASIC14.36□□□□□ -0.11
PCDH1Q08174 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCDH1Q08174 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCDH1Q08174 AC011840.2-201ENST00000563063 1520 ntBASIC14.36□□□□□ -0.11
PCDH1Q08174 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH1Q08174 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PCDH1Q08174 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
PCDH1Q08174 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH1Q08174 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PCDH1Q08174 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCDH1Q08174 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH1Q08174 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH1Q08174 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PCDH1Q08174 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PCDH1Q08174 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
PCDH1Q08174 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 CU639417.3-201ENST00000624240 1404 ntBASIC14.35□□□□□ -0.11
PCDH1Q08174 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH1Q08174 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH1Q08174 AL035633.1-201ENST00000406139 838 ntBASIC14.35□□□□□ -0.11
PCDH1Q08174 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms