Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 AC107890.1-201ENST00000422478 521 ntBASIC14.18□□□□□ -0.14
CHRNB3Q05901 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 MTND6P24-201ENST00000440466 518 ntBASIC14.18□□□□□ -0.14
CHRNB3Q05901 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 AC125807.1-201ENST00000483097 614 ntBASIC14.18□□□□□ -0.14
CHRNB3Q05901 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 AC026150.2-201ENST00000564693 1156 ntBASIC14.18□□□□□ -0.14
CHRNB3Q05901 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 AL096865.1-201ENST00000606796 927 ntBASIC14.18□□□□□ -0.14
CHRNB3Q05901 AC074044.1-201ENST00000609673 707 ntBASIC14.18□□□□□ -0.14
CHRNB3Q05901 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 AL121723.1-201ENST00000445194 1519 ntBASIC14.18□□□□□ -0.14
CHRNB3Q05901 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 AL035456.1-201ENST00000456064 1369 ntBASIC14.18□□□□□ -0.14
CHRNB3Q05901 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRNB3Q05901 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.18□□□□□ -0.14
CHRNB3Q05901 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 BASP1P1-201ENST00000430708 665 ntBASIC14.17□□□□□ -0.14
CHRNB3Q05901 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 SPCS2P1-201ENST00000561636 679 ntBASIC14.17□□□□□ -0.14
CHRNB3Q05901 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 MIR6080-201ENST00000617359 66 ntBASIC14.17□□□□□ -0.14
CHRNB3Q05901 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 KRT8P24-201ENST00000560290 1559 ntBASIC14.17□□□□□ -0.14
CHRNB3Q05901 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms