Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.16□□□□□ -0.14
SKP1P63208 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SKP1P63208 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.16□□□□□ -0.14
SKP1P63208 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
SKP1P63208 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.16□□□□□ -0.14
SKP1P63208 RN7SKP175-201ENST00000408472 289 ntBASIC14.16□□□□□ -0.14
SKP1P63208 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.16□□□□□ -0.14
SKP1P63208 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.16□□□□□ -0.14
SKP1P63208 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.16□□□□□ -0.14
SKP1P63208 AL391280.1-201ENST00000506969 1062 ntBASIC14.16□□□□□ -0.14
SKP1P63208 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.16□□□□□ -0.14
SKP1P63208 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.16□□□□□ -0.14
SKP1P63208 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.16□□□□□ -0.14
SKP1P63208 AC010328.2-201ENST00000597698 1111 ntBASIC14.16□□□□□ -0.14
SKP1P63208 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SKP1P63208 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.16□□□□□ -0.14
SKP1P63208 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 AC013726.1-201ENST00000563747 2285 ntBASIC14.16□□□□□ -0.14
SKP1P63208 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.16□□□□□ -0.14
SKP1P63208 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SKP1P63208 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SKP1P63208 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SKP1P63208 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.15□□□□□ -0.14
SKP1P63208 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.15□□□□□ -0.14
SKP1P63208 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.15□□□□□ -0.14
SKP1P63208 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.15□□□□□ -0.14
SKP1P63208 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.15□□□□□ -0.14
SKP1P63208 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.15□□□□□ -0.14
SKP1P63208 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.15□□□□□ -0.14
SKP1P63208 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.15□□□□□ -0.14
SKP1P63208 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SKP1P63208 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.15□□□□□ -0.14
SKP1P63208 AC079178.1-201ENST00000420915 656 ntBASIC14.15□□□□□ -0.14
SKP1P63208 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 AC026954.1-201ENST00000429771 1293 ntBASIC14.15□□□□□ -0.14
SKP1P63208 AC244107.1-201ENST00000442033 332 ntBASIC14.15□□□□□ -0.14
SKP1P63208 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.15□□□□□ -0.14
SKP1P63208 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.15□□□□□ -0.14
SKP1P63208 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.15□□□□□ -0.14
SKP1P63208 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.15□□□□□ -0.14
SKP1P63208 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.15□□□□□ -0.14
SKP1P63208 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.15□□□□□ -0.14
SKP1P63208 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.15□□□□□ -0.14
SKP1P63208 SNX29P1-201ENST00000548357 1007 ntBASIC14.15□□□□□ -0.14
SKP1P63208 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.15□□□□□ -0.14
SKP1P63208 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.15□□□□□ -0.14
SKP1P63208 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.15□□□□□ -0.14
SKP1P63208 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.15□□□□□ -0.14
SKP1P63208 AC008825.2-201ENST00000603374 718 ntBASIC14.15□□□□□ -0.14
SKP1P63208 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.15□□□□□ -0.14
SKP1P63208 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.15□□□□□ -0.14
SKP1P63208 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
SKP1P63208 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.15□□□□□ -0.14
SKP1P63208 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms