Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB1AP62820 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.15□□□□□ -0.3
RAB1AP62820 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAB1AP62820 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RAB1AP62820 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB1AP62820 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 FGD5P1-202ENST00000614866 2498 ntBASIC13.15□□□□□ -0.3
RAB1AP62820 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
RAB1AP62820 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RAB1AP62820 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
RAB1AP62820 BOLA2P3-201ENST00000404566 256 ntBASIC13.15□□□□□ -0.3
RAB1AP62820 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB1AP62820 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB1AP62820 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.15□□□□□ -0.3
RAB1AP62820 U91328.1-201ENST00000437528 223 ntBASIC13.15□□□□□ -0.3
RAB1AP62820 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB1AP62820 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.15□□□□□ -0.3
RAB1AP62820 CROCCP4-201ENST00000457096 498 ntBASIC13.15□□□□□ -0.3
RAB1AP62820 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAB1AP62820 RNA5SP486-201ENST00000515961 83 ntBASIC13.15□□□□□ -0.3
RAB1AP62820 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB1AP62820 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.15□□□□□ -0.3
RAB1AP62820 AC244669.2-201ENST00000612320 853 ntBASIC13.15□□□□□ -0.3
RAB1AP62820 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB1AP62820 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RAB1AP62820 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 AC013726.1-201ENST00000563747 2285 ntBASIC13.15□□□□□ -0.3
RAB1AP62820 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RAB1AP62820 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
RAB1AP62820 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1AP62820 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RAB1AP62820 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RAB1AP62820 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RAB1AP62820 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB1AP62820 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.14□□□□□ -0.31
RAB1AP62820 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RAB1AP62820 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1AP62820 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1AP62820 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1AP62820 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RAB1AP62820 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RAB1AP62820 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1AP62820 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1AP62820 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 GPR53P-205ENST00000457298 1084 ntBASIC13.14□□□□□ -0.31
RAB1AP62820 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB1AP62820 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RAB1AP62820 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.14□□□□□ -0.31
RAB1AP62820 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.14□□□□□ -0.31
RAB1AP62820 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RAB1AP62820 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB1AP62820 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB1AP62820 AL512343.1-201ENST00000605837 169 ntBASIC13.14□□□□□ -0.31
RAB1AP62820 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1AP62820 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB1AP62820 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RAB1AP62820 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1AP62820 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RAB1AP62820 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1AP62820 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB1AP62820 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1AP62820 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms