Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AC000095.1-201ENST00000603208 874 ntBASIC12.44□□□□□ -0.42
RIPPLY3P57055 AC079331.1-201ENST00000623200 1200 ntBASIC12.44□□□□□ -0.42
RIPPLY3P57055 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RIPPLY3P57055 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.44□□□□□ -0.42
RIPPLY3P57055 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RIPPLY3P57055 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.44□□□□□ -0.42
RIPPLY3P57055 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RIPPLY3P57055 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RIPPLY3P57055 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RIPPLY3P57055 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RIPPLY3P57055 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RIPPLY3P57055 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RIPPLY3P57055 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.44□□□□□ -0.42
RIPPLY3P57055 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RIPPLY3P57055 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RIPPLY3P57055 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RIPPLY3P57055 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RIPPLY3P57055 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RIPPLY3P57055 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.44□□□□□ -0.42
RIPPLY3P57055 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.44□□□□□ -0.42
RIPPLY3P57055 AC107918.4-201ENST00000641966 3141 ntBASIC12.44□□□□□ -0.42
RIPPLY3P57055 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RIPPLY3P57055 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.44□□□□□ -0.42
RIPPLY3P57055 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RIPPLY3P57055 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RIPPLY3P57055 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 AC138035.3-201ENST00000622706 2791 ntBASIC12.43□□□□□ -0.42
RIPPLY3P57055 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 AC139749.1-202ENST00000617529 3139 ntBASIC12.43□□□□□ -0.42
RIPPLY3P57055 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 OR51A9P-201ENST00000422578 911 ntBASIC12.43□□□□□ -0.42
RIPPLY3P57055 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 RNLS-203ENST00000437752 525 ntTSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 RCC2P8-201ENST00000502779 1035 ntBASIC12.43□□□□□ -0.42
RIPPLY3P57055 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 NAV1-210ENST00000593583 726 ntBASIC12.43□□□□□ -0.42
RIPPLY3P57055 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 AC011471.3-201ENST00000623576 402 ntBASIC12.43□□□□□ -0.42
RIPPLY3P57055 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 DRD5P1-201ENST00000456605 1438 ntBASIC12.43□□□□□ -0.42
RIPPLY3P57055 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.43□□□□□ -0.42
RIPPLY3P57055 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RIPPLY3P57055 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RIPPLY3P57055 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
RIPPLY3P57055 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RIPPLY3P57055 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms