Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLDN8P56748 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN8P56748 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CLDN8P56748 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLDN8P56748 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN8P56748 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN8P56748 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN8P56748 KRT18P25-201ENST00000508931 1278 ntBASIC14.17□□□□□ -0.14
CLDN8P56748 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 RFPL4AP1-201ENST00000530883 850 ntBASIC14.17□□□□□ -0.14
CLDN8P56748 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CLDN8P56748 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN8P56748 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CLDN8P56748 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.17□□□□□ -0.14
CLDN8P56748 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLDN8P56748 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.17□□□□□ -0.14
CLDN8P56748 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN8P56748 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CLDN8P56748 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 AC215219.1-201ENST00000400706 1817 ntBASIC14.17□□□□□ -0.14
CLDN8P56748 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN8P56748 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CLDN8P56748 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN8P56748 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN8P56748 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN8P56748 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN8P56748 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLDN8P56748 AC015688.4-201ENST00000580780 1647 ntBASIC14.16□□□□□ -0.14
CLDN8P56748 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLDN8P56748 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN8P56748 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLDN8P56748 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLDN8P56748 MBLAC2-202ENST00000514906 1936 ntBASIC14.16□□□□□ -0.14
CLDN8P56748 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CLDN8P56748 AC087499.6-201ENST00000411576 835 ntBASIC14.16□□□□□ -0.14
CLDN8P56748 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN8P56748 MYCLP2-201ENST00000449268 967 ntBASIC14.16□□□□□ -0.14
CLDN8P56748 FO681548.1-201ENST00000455617 1132 ntBASIC14.16□□□□□ -0.14
CLDN8P56748 INGX-202ENST00000489074 768 ntBASIC14.16□□□□□ -0.14
CLDN8P56748 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.16□□□□□ -0.14
CLDN8P56748 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN8P56748 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN8P56748 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.16□□□□□ -0.14
CLDN8P56748 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN8P56748 AP001063.1-201ENST00000568332 529 ntBASIC14.16□□□□□ -0.14
CLDN8P56748 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 CLUHP6-201ENST00000580789 941 ntBASIC14.16□□□□□ -0.14
CLDN8P56748 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.16□□□□□ -0.14
CLDN8P56748 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN8P56748 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN8P56748 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CLDN8P56748 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLDN8P56748 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLDN8P56748 KRT8P24-201ENST00000560290 1559 ntBASIC14.16□□□□□ -0.14
CLDN8P56748 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN8P56748 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms