Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RAB28P51157 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
RAB28P51157 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB28P51157 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAB28P51157 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB28P51157 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB28P51157 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB28P51157 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB28P51157 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB28P51157 BTBD6P1-201ENST00000412176 1267 ntBASIC14.34□□□□□ -0.11
RAB28P51157 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB28P51157 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.34□□□□□ -0.11
RAB28P51157 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB28P51157 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB28P51157 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.34□□□□□ -0.11
RAB28P51157 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB28P51157 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB28P51157 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB28P51157 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.34□□□□□ -0.11
RAB28P51157 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RAB28P51157 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB28P51157 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB28P51157 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RAB28P51157 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB28P51157 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB28P51157 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB28P51157 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB28P51157 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB28P51157 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB28P51157 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB28P51157 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RAB28P51157 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB28P51157 AL596257.1-201ENST00000641463 2694 ntBASIC14.33□□□□□ -0.12
RAB28P51157 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RAB28P51157 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB28P51157 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 LINC02228-204ENST00000642115 2962 ntBASIC14.33□□□□□ -0.12
RAB28P51157 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 MIR326-201ENST00000362220 95 ntBASIC14.33□□□□□ -0.12
RAB28P51157 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB28P51157 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RAB28P51157 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB28P51157 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB28P51157 GOLGA2P4-201ENST00000441462 777 ntBASIC14.33□□□□□ -0.12
RAB28P51157 HSPB1P2-201ENST00000448722 546 ntBASIC14.33□□□□□ -0.12
RAB28P51157 RPSAP36-202ENST00000494591 1261 ntBASIC14.33□□□□□ -0.12
RAB28P51157 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
RAB28P51157 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB28P51157 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB28P51157 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB28P51157 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB28P51157 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB28P51157 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB28P51157 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB28P51157 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB28P51157 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB28P51157 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB28P51157 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RAB28P51157 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RAB28P51157 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB28P51157 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms