Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.04□□□□□ -0.16
GABRA4P48169 AC138649.2-201ENST00000615886 705 ntBASIC14.04□□□□□ -0.16
GABRA4P48169 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
GABRA4P48169 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.04□□□□□ -0.16
GABRA4P48169 TUBBP5-203ENST00000508529 1334 ntBASIC14.04□□□□□ -0.16
GABRA4P48169 FAM90A7P-201ENST00000382628 1395 ntBASIC14.04□□□□□ -0.16
GABRA4P48169 FAM90A23P-201ENST00000400136 1395 ntBASIC14.04□□□□□ -0.16
GABRA4P48169 KRT8P28-201ENST00000433288 1390 ntBASIC14.04□□□□□ -0.16
GABRA4P48169 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.04□□□□□ -0.16
GABRA4P48169 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.04□□□□□ -0.16
GABRA4P48169 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRA4P48169 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
GABRA4P48169 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GABRA4P48169 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
GABRA4P48169 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRA4P48169 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.03□□□□□ -0.16
GABRA4P48169 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.03□□□□□ -0.16
GABRA4P48169 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.03□□□□□ -0.16
GABRA4P48169 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
GABRA4P48169 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRA4P48169 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.03□□□□□ -0.16
GABRA4P48169 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRA4P48169 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.03□□□□□ -0.16
GABRA4P48169 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
GABRA4P48169 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRA4P48169 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.03□□□□□ -0.16
GABRA4P48169 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GABRA4P48169 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.03□□□□□ -0.16
GABRA4P48169 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.03□□□□□ -0.16
GABRA4P48169 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA4P48169 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GABRA4P48169 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
GABRA4P48169 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA4P48169 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
GABRA4P48169 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA4P48169 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA4P48169 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
GABRA4P48169 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA4P48169 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA4P48169 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.02□□□□□ -0.16
GABRA4P48169 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.02□□□□□ -0.16
GABRA4P48169 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
GABRA4P48169 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.02□□□□□ -0.16
GABRA4P48169 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.02□□□□□ -0.16
GABRA4P48169 KHSRPP1-201ENST00000427983 1768 ntBASIC14.02□□□□□ -0.16
GABRA4P48169 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA4P48169 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
GABRA4P48169 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.02□□□□□ -0.16
GABRA4P48169 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.02□□□□□ -0.16
GABRA4P48169 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GABRA4P48169 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA4P48169 TMBIM7P-202ENST00000641474 1516 ntBASIC14.02□□□□□ -0.16
GABRA4P48169 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
GABRA4P48169 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.02□□□□□ -0.17
GABRA4P48169 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
GABRA4P48169 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
GABRA4P48169 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.02□□□□□ -0.17
GABRA4P48169 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.02□□□□□ -0.17
GABRA4P48169 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 BCYRN1-201ENST00000418539 200 ntBASIC14.02□□□□□ -0.17
GABRA4P48169 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.02□□□□□ -0.17
GABRA4P48169 AC005077.2-201ENST00000449786 690 ntBASIC14.02□□□□□ -0.17
GABRA4P48169 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.02□□□□□ -0.17
GABRA4P48169 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.02□□□□□ -0.17
GABRA4P48169 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.02□□□□□ -0.17
GABRA4P48169 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.02□□□□□ -0.17
GABRA4P48169 AC106794.1-201ENST00000506935 792 ntBASIC14.02□□□□□ -0.17
GABRA4P48169 SCARNA21-201ENST00000517026 139 ntBASIC14.02□□□□□ -0.17
GABRA4P48169 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.02□□□□□ -0.17
GABRA4P48169 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.02□□□□□ -0.17
GABRA4P48169 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms