Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HTR3AP46098 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HTR3AP46098 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HTR3AP46098 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HTR3AP46098 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HTR3AP46098 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HTR3AP46098 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HTR3AP46098 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.84□□□□□ -0.19
HTR3AP46098 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HTR3AP46098 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.84□□□□□ -0.19
HTR3AP46098 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HTR3AP46098 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.84□□□□□ -0.19
HTR3AP46098 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HTR3AP46098 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HTR3AP46098 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HTR3AP46098 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
HTR3AP46098 AC118758.2-201ENST00000614242 2813 ntBASIC13.83□□□□□ -0.19
HTR3AP46098 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.83□□□□□ -0.2
HTR3AP46098 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
HTR3AP46098 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HTR3AP46098 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.83□□□□□ -0.2
HTR3AP46098 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.83□□□□□ -0.2
HTR3AP46098 AL139094.1-201ENST00000405549 1188 ntBASIC13.83□□□□□ -0.2
HTR3AP46098 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.83□□□□□ -0.2
HTR3AP46098 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.83□□□□□ -0.2
HTR3AP46098 AP001063.1-201ENST00000568332 529 ntBASIC13.83□□□□□ -0.2
HTR3AP46098 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.83□□□□□ -0.2
HTR3AP46098 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.83□□□□□ -0.2
HTR3AP46098 AP005019.2-201ENST00000615104 511 ntBASIC13.83□□□□□ -0.2
HTR3AP46098 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.83□□□□□ -0.2
HTR3AP46098 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HTR3AP46098 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HTR3AP46098 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HTR3AP46098 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HTR3AP46098 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.83□□□□□ -0.2
HTR3AP46098 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR3AP46098 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.83□□□□□ -0.2
HTR3AP46098 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
HTR3AP46098 AL139385.1-201ENST00000611744 3272 ntBASIC13.82□□□□□ -0.2
HTR3AP46098 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HTR3AP46098 KRT8P14-201ENST00000414254 1442 ntBASIC13.82□□□□□ -0.2
HTR3AP46098 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HTR3AP46098 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HTR3AP46098 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR3AP46098 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
HTR3AP46098 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
HTR3AP46098 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.82□□□□□ -0.2
HTR3AP46098 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR3AP46098 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HTR3AP46098 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.82□□□□□ -0.2
HTR3AP46098 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.82□□□□□ -0.2
HTR3AP46098 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.82□□□□□ -0.2
HTR3AP46098 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.82□□□□□ -0.2
HTR3AP46098 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.82□□□□□ -0.2
HTR3AP46098 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR3AP46098 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR3AP46098 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR3AP46098 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR3AP46098 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR3AP46098 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HTR3AP46098 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HTR3AP46098 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR3AP46098 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HTR3AP46098 CRB3P1-201ENST00000449338 276 ntBASIC13.82□□□□□ -0.2
HTR3AP46098 KRT18P25-201ENST00000508931 1278 ntBASIC13.82□□□□□ -0.2
HTR3AP46098 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
HTR3AP46098 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.82□□□□□ -0.2
HTR3AP46098 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HTR3AP46098 AC009486.1-201ENST00000569860 813 ntBASIC13.82□□□□□ -0.2
HTR3AP46098 SPDYE22P-201ENST00000582158 798 ntBASIC13.82□□□□□ -0.2
HTR3AP46098 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.82□□□□□ -0.2
HTR3AP46098 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.82□□□□□ -0.2
HTR3AP46098 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.82□□□□□ -0.2
HTR3AP46098 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms