Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SSR1P43307 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.96■□□□□ 0.14
SSR1P43307 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SSR1P43307 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.95■□□□□ 0.14
SSR1P43307 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 AC005089.1-201ENST00000619486 2241 ntBASIC15.95■□□□□ 0.14
SSR1P43307 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SSR1P43307 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 AL137783.1-201ENST00000623494 1896 ntBASIC15.95■□□□□ 0.14
SSR1P43307 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.95■□□□□ 0.14
SSR1P43307 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SSR1P43307 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SSR1P43307 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
SSR1P43307 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SSR1P43307 MEP1AP4-201ENST00000423244 1087 ntBASIC15.95■□□□□ 0.14
SSR1P43307 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SSR1P43307 GAPDHP40-201ENST00000505218 1006 ntBASIC15.95■□□□□ 0.14
SSR1P43307 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.95■□□□□ 0.14
SSR1P43307 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.95■□□□□ 0.14
SSR1P43307 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.95■□□□□ 0.14
SSR1P43307 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.95■□□□□ 0.14
SSR1P43307 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SSR1P43307 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SSR1P43307 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.95■□□□□ 0.14
SSR1P43307 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.95■□□□□ 0.14
SSR1P43307 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.95■□□□□ 0.14
SSR1P43307 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSR1P43307 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SSR1P43307 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SSR1P43307 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.94■□□□□ 0.14
SSR1P43307 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.94■□□□□ 0.14
SSR1P43307 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SSR1P43307 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.94■□□□□ 0.14
SSR1P43307 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.94■□□□□ 0.14
SSR1P43307 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SSR1P43307 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.94■□□□□ 0.14
SSR1P43307 CYMP-203ENST00000474680 1263 ntBASIC15.94■□□□□ 0.14
SSR1P43307 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.94■□□□□ 0.14
SSR1P43307 AC026410.3-201ENST00000514280 936 ntBASIC15.94■□□□□ 0.14
SSR1P43307 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.94■□□□□ 0.14
SSR1P43307 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.94■□□□□ 0.14
SSR1P43307 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.94■□□□□ 0.14
SSR1P43307 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.94■□□□□ 0.14
SSR1P43307 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.94■□□□□ 0.14
SSR1P43307 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SSR1P43307 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.94■□□□□ 0.14
SSR1P43307 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.94■□□□□ 0.14
SSR1P43307 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SSR1P43307 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.94■□□□□ 0.14
SSR1P43307 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.94■□□□□ 0.14
SSR1P43307 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.94■□□□□ 0.14
SSR1P43307 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSR1P43307 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SSR1P43307 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms