Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.47□□□□□ -0.25
APOBEC1P41238 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.47□□□□□ -0.25
APOBEC1P41238 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.47□□□□□ -0.25
APOBEC1P41238 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 KLF2P4-201ENST00000451959 1225 ntBASIC13.47□□□□□ -0.25
APOBEC1P41238 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.47□□□□□ -0.25
APOBEC1P41238 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.47□□□□□ -0.25
APOBEC1P41238 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.47□□□□□ -0.25
APOBEC1P41238 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.47□□□□□ -0.25
APOBEC1P41238 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
APOBEC1P41238 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 PDIA3P1-201ENST00000471856 1510 ntBASIC13.47□□□□□ -0.25
APOBEC1P41238 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.47□□□□□ -0.25
APOBEC1P41238 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.47□□□□□ -0.25
APOBEC1P41238 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.47□□□□□ -0.25
APOBEC1P41238 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.47□□□□□ -0.25
APOBEC1P41238 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.47□□□□□ -0.25
APOBEC1P41238 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.47□□□□□ -0.25
APOBEC1P41238 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
APOBEC1P41238 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.46□□□□□ -0.25
APOBEC1P41238 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.46□□□□□ -0.25
APOBEC1P41238 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.46□□□□□ -0.25
APOBEC1P41238 AGGF1P1-201ENST00000509500 2073 ntBASIC13.46□□□□□ -0.25
APOBEC1P41238 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.46□□□□□ -0.25
APOBEC1P41238 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.46□□□□□ -0.25
APOBEC1P41238 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.46□□□□□ -0.25
APOBEC1P41238 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.46□□□□□ -0.25
APOBEC1P41238 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
APOBEC1P41238 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.46□□□□□ -0.25
APOBEC1P41238 AC004945.1-201ENST00000416738 983 ntBASIC13.46□□□□□ -0.25
APOBEC1P41238 AC112492.5-201ENST00000421897 457 ntBASIC13.46□□□□□ -0.25
APOBEC1P41238 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.46□□□□□ -0.25
APOBEC1P41238 CROCCP4-201ENST00000457096 498 ntBASIC13.46□□□□□ -0.25
APOBEC1P41238 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.46□□□□□ -0.25
APOBEC1P41238 COX5BP1-201ENST00000507622 393 ntBASIC13.46□□□□□ -0.25
APOBEC1P41238 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.46□□□□□ -0.25
APOBEC1P41238 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.46□□□□□ -0.25
APOBEC1P41238 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.46□□□□□ -0.25
APOBEC1P41238 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.46□□□□□ -0.25
APOBEC1P41238 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.46□□□□□ -0.25
APOBEC1P41238 RN7SL713P-201ENST00000582127 302 ntBASIC13.46□□□□□ -0.25
APOBEC1P41238 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.46□□□□□ -0.25
APOBEC1P41238 AL512343.1-201ENST00000605837 169 ntBASIC13.46□□□□□ -0.25
APOBEC1P41238 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBEC1P41238 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
APOBEC1P41238 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.46□□□□□ -0.26
APOBEC1P41238 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
APOBEC1P41238 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
APOBEC1P41238 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
APOBEC1P41238 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.26
APOBEC1P41238 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
APOBEC1P41238 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
APOBEC1P41238 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
APOBEC1P41238 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
APOBEC1P41238 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.45□□□□□ -0.26
APOBEC1P41238 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOBEC1P41238 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
APOBEC1P41238 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOBEC1P41238 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOBEC1P41238 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.45□□□□□ -0.26
APOBEC1P41238 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
APOBEC1P41238 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOBEC1P41238 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
APOBEC1P41238 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOBEC1P41238 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.45□□□□□ -0.26
APOBEC1P41238 SNX18-202ENST00000343017 3140 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms