Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
MDH1P40925 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 TFAMP1-201ENST00000412727 736 ntBASIC14.98□□□□□ -0.01
MDH1P40925 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 AC074386.1-202ENST00000463561 864 ntBASIC14.98□□□□□ -0.01
MDH1P40925 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.98□□□□□ -0.01
MDH1P40925 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.98□□□□□ -0.01
MDH1P40925 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.98□□□□□ -0.01
MDH1P40925 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.98□□□□□ -0.01
MDH1P40925 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MDH1P40925 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.98□□□□□ -0.01
MDH1P40925 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
MDH1P40925 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
MDH1P40925 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MDH1P40925 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
MDH1P40925 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.98□□□□□ -0.01
MDH1P40925 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.98□□□□□ -0.01
MDH1P40925 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.98□□□□□ -0.01
MDH1P40925 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.98□□□□□ -0.01
MDH1P40925 AL031595.1-201ENST00000623969 4709 ntBASIC14.98□□□□□ -0.01
MDH1P40925 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MDH1P40925 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
MDH1P40925 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
MDH1P40925 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
MDH1P40925 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.97□□□□□ -0.01
MDH1P40925 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.97□□□□□ -0.01
MDH1P40925 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 KRT8P35-201ENST00000483942 1338 ntBASIC14.97□□□□□ -0.01
MDH1P40925 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.97□□□□□ -0.01
MDH1P40925 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
MDH1P40925 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
MDH1P40925 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MDH1P40925 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.97□□□□□ -0.01
MDH1P40925 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
MDH1P40925 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
MDH1P40925 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.97□□□□□ -0.01
MDH1P40925 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.97□□□□□ -0.01
MDH1P40925 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.97□□□□□ -0.01
MDH1P40925 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.97□□□□□ -0.01
MDH1P40925 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.97□□□□□ -0.01
MDH1P40925 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.97□□□□□ -0.01
MDH1P40925 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MDH1P40925 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.97□□□□□ -0.01
MDH1P40925 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.97□□□□□ -0.01
MDH1P40925 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
MDH1P40925 AC018845.2-201ENST00000568326 409 ntBASIC14.97□□□□□ -0.01
MDH1P40925 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.97□□□□□ -0.01
MDH1P40925 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.97□□□□□ -0.01
MDH1P40925 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.97□□□□□ -0.01
MDH1P40925 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.97□□□□□ -0.01
MDH1P40925 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.97□□□□□ -0.01
MDH1P40925 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.97□□□□□ -0.01
MDH1P40925 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.97□□□□□ -0.01
MDH1P40925 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.97□□□□□ -0.01
MDH1P40925 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MDH1P40925 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MDH1P40925 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.97□□□□□ -0.01
MDH1P40925 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MDH1P40925 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.97□□□□□ -0.01
MDH1P40925 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.96□□□□□ -0.01
MDH1P40925 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
MDH1P40925 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.96□□□□□ -0.01
MDH1P40925 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms