Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.1■□□□□ 0.49
PDE6BP35913 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 WASH3P-207ENST00000560956 1394 ntBASIC18.1■□□□□ 0.49
PDE6BP35913 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PDE6BP35913 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PDE6BP35913 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PDE6BP35913 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC18.1■□□□□ 0.49
PDE6BP35913 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.1■□□□□ 0.49
PDE6BP35913 GCSHP3-201ENST00000431120 391 ntBASIC18.1■□□□□ 0.49
PDE6BP35913 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.1■□□□□ 0.49
PDE6BP35913 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.1■□□□□ 0.49
PDE6BP35913 AC124068.2-201ENST00000569473 1109 ntBASIC18.1■□□□□ 0.49
PDE6BP35913 AC006158.1-201ENST00000610661 249 ntBASIC18.1■□□□□ 0.49
PDE6BP35913 AC073592.2-201ENST00000623062 780 ntBASIC18.1■□□□□ 0.49
PDE6BP35913 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
PDE6BP35913 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PDE6BP35913 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.1■□□□□ 0.49
PDE6BP35913 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.1■□□□□ 0.49
PDE6BP35913 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.1■□□□□ 0.49
PDE6BP35913 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PDE6BP35913 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PDE6BP35913 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6BP35913 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.09■□□□□ 0.49
PDE6BP35913 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PDE6BP35913 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDE6BP35913 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 AC073869.2-201ENST00000417338 1026 ntBASIC18.09■□□□□ 0.49
PDE6BP35913 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.09■□□□□ 0.49
PDE6BP35913 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6BP35913 AC026410.1-201ENST00000507366 1101 ntBASIC18.09■□□□□ 0.49
PDE6BP35913 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.09■□□□□ 0.49
PDE6BP35913 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC18.09■□□□□ 0.49
PDE6BP35913 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6BP35913 RN7SL596P-201ENST00000582123 288 ntBASIC18.09■□□□□ 0.49
PDE6BP35913 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6BP35913 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDE6BP35913 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6BP35913 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PDE6BP35913 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6BP35913 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDE6BP35913 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.09■□□□□ 0.49
PDE6BP35913 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
PDE6BP35913 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
PDE6BP35913 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.08■□□□□ 0.49
PDE6BP35913 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6BP35913 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6BP35913 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDE6BP35913 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PDE6BP35913 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.08■□□□□ 0.48
PDE6BP35913 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
PDE6BP35913 SERF2-206ENST00000409291 807 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE6BP35913 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC18.08■□□□□ 0.48
PDE6BP35913 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC18.08■□□□□ 0.48
PDE6BP35913 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE6BP35913 ERP29P1-201ENST00000442902 706 ntBASIC18.08■□□□□ 0.48
PDE6BP35913 RPL18AP8-201ENST00000486071 528 ntBASIC18.08■□□□□ 0.48
PDE6BP35913 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.08■□□□□ 0.48
PDE6BP35913 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6BP35913 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PDE6BP35913 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE6BP35913 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE6BP35913 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE6BP35913 AC011247.3-201ENST00000603297 438 ntBASIC18.08■□□□□ 0.48
PDE6BP35913 AC244250.3-201ENST00000620749 366 ntBASIC18.08■□□□□ 0.48
PDE6BP35913 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PDE6BP35913 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6BP35913 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6BP35913 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6BP35913 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.08■□□□□ 0.48
PDE6BP35913 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6BP35913 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.08■□□□□ 0.48
PDE6BP35913 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6BP35913 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDE6BP35913 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC18.08■□□□□ 0.48
PDE6BP35913 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms