Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COPB2P35606 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.95■□□□□ 0.3
COPB2P35606 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.95■□□□□ 0.3
COPB2P35606 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.95■□□□□ 0.3
COPB2P35606 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COPB2P35606 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COPB2P35606 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.94■□□□□ 0.3
COPB2P35606 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.94■□□□□ 0.3
COPB2P35606 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COPB2P35606 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.94■□□□□ 0.3
COPB2P35606 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COPB2P35606 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COPB2P35606 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.94■□□□□ 0.3
COPB2P35606 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.94■□□□□ 0.3
COPB2P35606 AC006122.1-201ENST00000493323 440 ntBASIC16.94■□□□□ 0.3
COPB2P35606 AC116345.2-201ENST00000512837 523 ntBASIC16.94■□□□□ 0.3
COPB2P35606 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.94■□□□□ 0.3
COPB2P35606 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 RTN3P1-201ENST00000536295 711 ntBASIC16.94■□□□□ 0.3
COPB2P35606 AC012044.1-201ENST00000603431 297 ntBASIC16.94■□□□□ 0.3
COPB2P35606 AC133540.1-201ENST00000620845 1019 ntBASIC16.94■□□□□ 0.3
COPB2P35606 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
COPB2P35606 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COPB2P35606 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
COPB2P35606 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.94■□□□□ 0.3
COPB2P35606 AL136379.1-201ENST00000623471 2642 ntBASIC16.94■□□□□ 0.3
COPB2P35606 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
COPB2P35606 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.94■□□□□ 0.3
COPB2P35606 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.94■□□□□ 0.3
COPB2P35606 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPB2P35606 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
COPB2P35606 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.94■□□□□ 0.3
COPB2P35606 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 KRT8P21-201ENST00000430398 1491 ntBASIC16.93■□□□□ 0.3
COPB2P35606 AC023024.2-201ENST00000623561 1993 ntBASIC16.93■□□□□ 0.3
COPB2P35606 AC112693.3-201ENST00000624819 1983 ntBASIC16.93■□□□□ 0.3
COPB2P35606 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.93■□□□□ 0.3
COPB2P35606 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.93■□□□□ 0.3
COPB2P35606 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.93■□□□□ 0.3
COPB2P35606 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COPB2P35606 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COPB2P35606 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.93■□□□□ 0.3
COPB2P35606 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 MIR33B-201ENST00000385104 96 ntBASIC16.93■□□□□ 0.3
COPB2P35606 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COPB2P35606 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.93■□□□□ 0.3
COPB2P35606 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.93■□□□□ 0.3
COPB2P35606 AL645933.1-201ENST00000440087 609 ntBASIC16.93■□□□□ 0.3
COPB2P35606 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.93■□□□□ 0.3
COPB2P35606 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.93■□□□□ 0.3
COPB2P35606 RN7SL258P-201ENST00000478664 300 ntBASIC16.93■□□□□ 0.3
COPB2P35606 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.93■□□□□ 0.3
COPB2P35606 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.93■□□□□ 0.3
COPB2P35606 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.93■□□□□ 0.3
COPB2P35606 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.93■□□□□ 0.3
COPB2P35606 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.93■□□□□ 0.3
COPB2P35606 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
COPB2P35606 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
COPB2P35606 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.93■□□□□ 0.3
COPB2P35606 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.93■□□□□ 0.3
COPB2P35606 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
COPB2P35606 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPB2P35606 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.92■□□□□ 0.3
COPB2P35606 PKD1P5-201ENST00000532415 10291 ntBASIC16.92■□□□□ 0.3
COPB2P35606 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.92■□□□□ 0.3
COPB2P35606 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.92■□□□□ 0.3
COPB2P35606 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
COPB2P35606 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
COPB2P35606 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms