Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.65■□□□□ 0.74
USP6P35125 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP6P35125 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP6P35125 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.64■□□□□ 0.74
USP6P35125 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
USP6P35125 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP6P35125 AGGF1P1-201ENST00000509500 2073 ntBASIC19.64■□□□□ 0.74
USP6P35125 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP6P35125 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP6P35125 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC19.64■□□□□ 0.74
USP6P35125 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
USP6P35125 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP6P35125 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC19.64■□□□□ 0.73
USP6P35125 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP6P35125 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP6P35125 RN7SKP109-201ENST00000410592 316 ntBASIC19.64■□□□□ 0.73
USP6P35125 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC19.64■□□□□ 0.73
USP6P35125 AC004837.1-201ENST00000446267 564 ntBASIC19.64■□□□□ 0.73
USP6P35125 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC19.64■□□□□ 0.73
USP6P35125 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC19.64■□□□□ 0.73
USP6P35125 ALG1L13P-202ENST00000519320 584 ntBASIC19.64■□□□□ 0.73
USP6P35125 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
USP6P35125 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC19.64■□□□□ 0.73
USP6P35125 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
USP6P35125 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP6P35125 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP6P35125 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
USP6P35125 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.64■□□□□ 0.73
USP6P35125 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP6P35125 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP6P35125 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP6P35125 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 AC073347.1-201ENST00000421633 2643 ntBASIC19.63■□□□□ 0.73
USP6P35125 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
USP6P35125 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6P35125 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6P35125 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6P35125 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC19.63■□□□□ 0.73
USP6P35125 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
USP6P35125 AC140658.4-201ENST00000561990 352 ntBASIC19.63■□□□□ 0.73
USP6P35125 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC19.63■□□□□ 0.73
USP6P35125 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC19.63■□□□□ 0.73
USP6P35125 MIR5196-201ENST00000578146 115 ntBASIC19.63■□□□□ 0.73
USP6P35125 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6P35125 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6P35125 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6P35125 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6P35125 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6P35125 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC19.63■□□□□ 0.73
USP6P35125 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.63■□□□□ 0.73
USP6P35125 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6P35125 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
USP6P35125 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP6P35125 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 AL354702.1-201ENST00000442006 1960 ntBASIC19.63■□□□□ 0.73
USP6P35125 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6P35125 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP6P35125 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.63■□□□□ 0.73
USP6P35125 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.63■□□□□ 0.73
USP6P35125 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP6P35125 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
USP6P35125 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
USP6P35125 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 PYY2-201ENST00000315776 282 ntBASIC19.62■□□□□ 0.73
USP6P35125 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC19.62■□□□□ 0.73
USP6P35125 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
USP6P35125 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 CELP-201ENST00000411440 1249 ntTSL 5 BASIC19.62■□□□□ 0.73
USP6P35125 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
USP6P35125 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
USP6P35125 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
USP6P35125 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 LINC00634-202ENST00000505157 222 ntBASIC19.62■□□□□ 0.73
USP6P35125 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
USP6P35125 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC19.62■□□□□ 0.73
USP6P35125 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms