Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC20.37■□□□□ 0.85
CPS1P31327 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC20.37■□□□□ 0.85
CPS1P31327 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC20.37■□□□□ 0.85
CPS1P31327 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CPS1P31327 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CPS1P31327 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 AP002353.1-201ENST00000528257 1599 ntBASIC20.37■□□□□ 0.85
CPS1P31327 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CPS1P31327 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC20.37■□□□□ 0.85
CPS1P31327 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.37■□□□□ 0.85
CPS1P31327 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CPS1P31327 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC20.37■□□□□ 0.85
CPS1P31327 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CPS1P31327 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC20.37■□□□□ 0.85
CPS1P31327 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
CPS1P31327 CD164-210ENST00000512821 964 ntTSL 2 BASIC20.37■□□□□ 0.85
CPS1P31327 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC20.37■□□□□ 0.85
CPS1P31327 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC20.37■□□□□ 0.85
CPS1P31327 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CPS1P31327 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC20.36■□□□□ 0.85
CPS1P31327 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPS1P31327 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.36■□□□□ 0.85
CPS1P31327 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CPS1P31327 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPS1P31327 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPS1P31327 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPS1P31327 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPS1P31327 GSN-206ENST00000394353 2311 ntTSL 2 BASIC20.36■□□□□ 0.85
CPS1P31327 AC136621.1-201ENST00000624017 2304 ntBASIC20.36■□□□□ 0.85
CPS1P31327 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CPS1P31327 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPS1P31327 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CPS1P31327 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CPS1P31327 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPS1P31327 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPS1P31327 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CPS1P31327 AL121949.3-201ENST00000406684 385 ntBASIC20.36■□□□□ 0.85
CPS1P31327 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC20.36■□□□□ 0.85
CPS1P31327 OR8T1P-201ENST00000421347 918 ntBASIC20.36■□□□□ 0.85
CPS1P31327 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CPS1P31327 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC20.36■□□□□ 0.85
CPS1P31327 RN7SL602P-201ENST00000578326 324 ntBASIC20.36■□□□□ 0.85
CPS1P31327 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC20.36■□□□□ 0.85
CPS1P31327 RN7SL718P-201ENST00000581254 303 ntBASIC20.36■□□□□ 0.85
CPS1P31327 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPS1P31327 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC20.36■□□□□ 0.85
CPS1P31327 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC20.36■□□□□ 0.85
CPS1P31327 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPS1P31327 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CPS1P31327 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CPS1P31327 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPS1P31327 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPS1P31327 ACE3P-201ENST00000423435 1973 ntBASIC20.35■□□□□ 0.85
CPS1P31327 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
CPS1P31327 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC20.35■□□□□ 0.85
CPS1P31327 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPS1P31327 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPS1P31327 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
CPS1P31327 AC008536.3-201ENST00000623282 1599 ntBASIC20.35■□□□□ 0.85
CPS1P31327 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC20.35■□□□□ 0.85
CPS1P31327 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC20.35■□□□□ 0.85
CPS1P31327 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPS1P31327 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
CPS1P31327 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPS1P31327 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC20.35■□□□□ 0.85
CPS1P31327 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPS1P31327 NQO2-204ENST00000380454 851 ntTSL 2 BASIC20.35■□□□□ 0.85
CPS1P31327 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC20.35■□□□□ 0.85
CPS1P31327 NRADDP-201ENST00000437305 691 ntBASIC20.35■□□□□ 0.85
CPS1P31327 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC20.35■□□□□ 0.85
CPS1P31327 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC20.35■□□□□ 0.85
CPS1P31327 TYMSP2-201ENST00000589501 424 ntBASIC20.35■□□□□ 0.85
CPS1P31327 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC20.35■□□□□ 0.85
CPS1P31327 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CPS1P31327 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC20.35■□□□□ 0.85
CPS1P31327 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPS1P31327 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC20.35■□□□□ 0.85
CPS1P31327 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPS1P31327 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CPS1P31327 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPS1P31327 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms