Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CHMLP26374 AL035633.1-201ENST00000406139 838 ntBASIC17.88■□□□□ 0.45
CHMLP26374 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMLP26374 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.88■□□□□ 0.45
CHMLP26374 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMLP26374 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.88■□□□□ 0.45
CHMLP26374 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.88■□□□□ 0.45
CHMLP26374 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CHMLP26374 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMLP26374 AC073413.1-201ENST00000603927 732 ntBASIC17.88■□□□□ 0.45
CHMLP26374 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMLP26374 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHMLP26374 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMLP26374 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.88■□□□□ 0.45
CHMLP26374 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMLP26374 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMLP26374 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMLP26374 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMLP26374 AC020910.6-201ENST00000623084 1459 ntBASIC17.88■□□□□ 0.45
CHMLP26374 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.88■□□□□ 0.45
CHMLP26374 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.87■□□□□ 0.45
CHMLP26374 AC063926.3-201ENST00000624734 5658 ntBASIC17.87■□□□□ 0.45
CHMLP26374 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMLP26374 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHMLP26374 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
CHMLP26374 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHMLP26374 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
CHMLP26374 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMLP26374 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMLP26374 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHMLP26374 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.87■□□□□ 0.45
CHMLP26374 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMLP26374 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CHMLP26374 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMLP26374 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMLP26374 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMLP26374 AC006001.1-201ENST00000325130 474 ntBASIC17.87■□□□□ 0.45
CHMLP26374 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMLP26374 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CHMLP26374 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
CHMLP26374 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMLP26374 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMLP26374 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMLP26374 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CHMLP26374 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.87■□□□□ 0.45
CHMLP26374 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMLP26374 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CHMLP26374 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMLP26374 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.87■□□□□ 0.45
CHMLP26374 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMLP26374 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMLP26374 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMLP26374 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMLP26374 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMLP26374 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMLP26374 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CHMLP26374 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMLP26374 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHMLP26374 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMLP26374 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMLP26374 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMLP26374 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMLP26374 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHMLP26374 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMLP26374 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMLP26374 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMLP26374 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHMLP26374 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMLP26374 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMLP26374 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMLP26374 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMLP26374 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMLP26374 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMLP26374 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMLP26374 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMLP26374 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMLP26374 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMLP26374 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.86■□□□□ 0.45
CHMLP26374 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHMLP26374 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMLP26374 ARSEP1-201ENST00000420443 635 ntBASIC17.86■□□□□ 0.45
CHMLP26374 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMLP26374 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMLP26374 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.86■□□□□ 0.45
CHMLP26374 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.86■□□□□ 0.45
CHMLP26374 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms