Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.96□□□□□ -0.17
NR4A1P22736 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
NR4A1P22736 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR4A1P22736 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
NR4A1P22736 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
NR4A1P22736 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR4A1P22736 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
NR4A1P22736 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
NR4A1P22736 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR4A1P22736 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
NR4A1P22736 AC023090.2-201ENST00000625182 2110 ntBASIC13.96□□□□□ -0.18
NR4A1P22736 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
NR4A1P22736 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.96□□□□□ -0.18
NR4A1P22736 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.95□□□□□ -0.18
NR4A1P22736 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NR4A1P22736 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.95□□□□□ -0.18
NR4A1P22736 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.95□□□□□ -0.18
NR4A1P22736 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.95□□□□□ -0.18
NR4A1P22736 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NR4A1P22736 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.95□□□□□ -0.18
NR4A1P22736 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
NR4A1P22736 AL139010.1-201ENST00000454878 894 ntBASIC13.95□□□□□ -0.18
NR4A1P22736 HLA-V-204ENST00000476601 1289 ntBASIC13.95□□□□□ -0.18
NR4A1P22736 AC097493.3-201ENST00000509725 367 ntBASIC13.95□□□□□ -0.18
NR4A1P22736 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.95□□□□□ -0.18
NR4A1P22736 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.95□□□□□ -0.18
NR4A1P22736 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.95□□□□□ -0.18
NR4A1P22736 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.95□□□□□ -0.18
NR4A1P22736 AC005498.2-205ENST00000593218 784 ntBASIC13.95□□□□□ -0.18
NR4A1P22736 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
NR4A1P22736 AL133215.2-201ENST00000609242 977 ntBASIC13.95□□□□□ -0.18
NR4A1P22736 AC073592.8-201ENST00000624126 511 ntBASIC13.95□□□□□ -0.18
NR4A1P22736 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
NR4A1P22736 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.95□□□□□ -0.18
NR4A1P22736 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NR4A1P22736 CICP16-201ENST00000502609 2813 ntBASIC13.95□□□□□ -0.18
NR4A1P22736 CETN4P-206ENST00000642099 2168 ntBASIC13.95□□□□□ -0.18
NR4A1P22736 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR4A1P22736 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.95□□□□□ -0.18
NR4A1P22736 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.94□□□□□ -0.18
NR4A1P22736 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NR4A1P22736 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.94□□□□□ -0.18
NR4A1P22736 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.94□□□□□ -0.18
NR4A1P22736 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NR4A1P22736 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NR4A1P22736 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.94□□□□□ -0.18
NR4A1P22736 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.94□□□□□ -0.18
NR4A1P22736 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.94□□□□□ -0.18
NR4A1P22736 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.94□□□□□ -0.18
NR4A1P22736 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.94□□□□□ -0.18
NR4A1P22736 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.94□□□□□ -0.18
NR4A1P22736 RNA5SP421-201ENST00000516864 134 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms