Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN2P17655 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN2P17655 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CAPN2P17655 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN2P17655 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CAPN2P17655 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN2P17655 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.24■□□□□ 0.35
CAPN2P17655 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.24■□□□□ 0.35
CAPN2P17655 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.24■□□□□ 0.35
CAPN2P17655 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.24■□□□□ 0.35
CAPN2P17655 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.24■□□□□ 0.35
CAPN2P17655 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.24■□□□□ 0.35
CAPN2P17655 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.24■□□□□ 0.35
CAPN2P17655 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.24■□□□□ 0.35
CAPN2P17655 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 PPY2P-201ENST00000582808 702 ntBASIC17.24■□□□□ 0.35
CAPN2P17655 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 AL133499.1-201ENST00000596207 608 ntBASIC17.24■□□□□ 0.35
CAPN2P17655 AC006453.1-201ENST00000636037 1257 ntBASIC17.24■□□□□ 0.35
CAPN2P17655 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN2P17655 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
CAPN2P17655 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN2P17655 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN2P17655 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CAPN2P17655 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CAPN2P17655 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.24■□□□□ 0.35
CAPN2P17655 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN2P17655 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.24■□□□□ 0.35
CAPN2P17655 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.24■□□□□ 0.35
CAPN2P17655 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN2P17655 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CAPN2P17655 AC009090.5-201ENST00000624886 2285 ntBASIC17.23■□□□□ 0.35
CAPN2P17655 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN2P17655 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN2P17655 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN2P17655 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CAPN2P17655 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CAPN2P17655 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN2P17655 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN2P17655 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN2P17655 AC069218.1-201ENST00000435269 762 ntBASIC17.23■□□□□ 0.35
CAPN2P17655 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.23■□□□□ 0.35
CAPN2P17655 AC012618.1-201ENST00000461223 412 ntBASIC17.23■□□□□ 0.35
CAPN2P17655 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.23■□□□□ 0.35
CAPN2P17655 MARK2P5-201ENST00000507649 634 ntBASIC17.23■□□□□ 0.35
CAPN2P17655 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN2P17655 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN2P17655 AP000346.4-201ENST00000614827 381 ntBASIC17.23■□□□□ 0.35
CAPN2P17655 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN2P17655 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN2P17655 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.23■□□□□ 0.35
CAPN2P17655 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CAPN2P17655 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.23■□□□□ 0.35
CAPN2P17655 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
CAPN2P17655 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN2P17655 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN2P17655 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CAPN2P17655 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN2P17655 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN2P17655 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CAPN2P17655 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CAPN2P17655 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN2P17655 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
CAPN2P17655 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.22■□□□□ 0.35
CAPN2P17655 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN2P17655 MIR600HG-201ENST00000449175 5984 ntBASIC17.22■□□□□ 0.35
CAPN2P17655 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms