Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.5■□□□□ 0.39
TOP1P11387 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.5■□□□□ 0.39
TOP1P11387 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.5■□□□□ 0.39
TOP1P11387 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.5■□□□□ 0.39
TOP1P11387 AC009093.2-202ENST00000620513 2079 ntBASIC17.5■□□□□ 0.39
TOP1P11387 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.5■□□□□ 0.39
TOP1P11387 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.5■□□□□ 0.39
TOP1P11387 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TOP1P11387 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.5■□□□□ 0.39
TOP1P11387 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TOP1P11387 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.5■□□□□ 0.39
TOP1P11387 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.49■□□□□ 0.39
TOP1P11387 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.49■□□□□ 0.39
TOP1P11387 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.49■□□□□ 0.39
TOP1P11387 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TOP1P11387 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TOP1P11387 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TOP1P11387 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TOP1P11387 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TOP1P11387 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.49■□□□□ 0.39
TOP1P11387 AL591846.1-201ENST00000451736 433 ntBASIC17.49■□□□□ 0.39
TOP1P11387 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.49■□□□□ 0.39
TOP1P11387 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.49■□□□□ 0.39
TOP1P11387 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.49■□□□□ 0.39
TOP1P11387 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TOP1P11387 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.49■□□□□ 0.39
TOP1P11387 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TOP1P11387 AC002472.3-201ENST00000640124 621 ntBASIC17.49■□□□□ 0.39
TOP1P11387 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 AC005089.1-201ENST00000619486 2241 ntBASIC17.49■□□□□ 0.39
TOP1P11387 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.49■□□□□ 0.39
TOP1P11387 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.49■□□□□ 0.39
TOP1P11387 AC097376.2-205ENST00000610159 5334 ntBASIC17.49■□□□□ 0.39
TOP1P11387 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TOP1P11387 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.49■□□□□ 0.39
TOP1P11387 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.49■□□□□ 0.39
TOP1P11387 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.49■□□□□ 0.39
TOP1P11387 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.49■□□□□ 0.39
TOP1P11387 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
TOP1P11387 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP1P11387 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.49■□□□□ 0.39
TOP1P11387 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 SALL4P5-201ENST00000419001 1760 ntBASIC17.48■□□□□ 0.39
TOP1P11387 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TOP1P11387 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.48■□□□□ 0.39
TOP1P11387 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TOP1P11387 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TOP1P11387 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.48■□□□□ 0.39
TOP1P11387 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 HSPB1P2-201ENST00000448722 546 ntBASIC17.48■□□□□ 0.39
TOP1P11387 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.48■□□□□ 0.39
TOP1P11387 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.48■□□□□ 0.39
TOP1P11387 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.48■□□□□ 0.39
TOP1P11387 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.48■□□□□ 0.39
TOP1P11387 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.48■□□□□ 0.39
TOP1P11387 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.48■□□□□ 0.39
TOP1P11387 AL358472.3-201ENST00000608147 415 ntBASIC17.48■□□□□ 0.39
TOP1P11387 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.48■□□□□ 0.39
TOP1P11387 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.48■□□□□ 0.39
TOP1P11387 AP001002.3-201ENST00000623482 206 ntBASIC17.48■□□□□ 0.39
TOP1P11387 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TOP1P11387 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms