Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC20.53■□□□□ 0.88
LAMC1P11047 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LAMC1P11047 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LAMC1P11047 AC073911.3-201ENST00000624401 631 ntBASIC20.53■□□□□ 0.88
LAMC1P11047 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LAMC1P11047 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LAMC1P11047 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
LAMC1P11047 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.53■□□□□ 0.88
LAMC1P11047 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC20.53■□□□□ 0.88
LAMC1P11047 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC20.53■□□□□ 0.88
LAMC1P11047 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LAMC1P11047 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LAMC1P11047 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LAMC1P11047 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
LAMC1P11047 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LAMC1P11047 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
LAMC1P11047 HPGD-203ENST00000422112 805 ntTSL 2 BASIC20.53■□□□□ 0.88
LAMC1P11047 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LAMC1P11047 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC20.53■□□□□ 0.88
LAMC1P11047 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC20.53■□□□□ 0.88
LAMC1P11047 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC20.53■□□□□ 0.88
LAMC1P11047 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC20.53■□□□□ 0.88
LAMC1P11047 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC20.53■□□□□ 0.88
LAMC1P11047 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LAMC1P11047 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LAMC1P11047 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LAMC1P11047 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC20.52■□□□□ 0.88
LAMC1P11047 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LAMC1P11047 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LAMC1P11047 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.52■□□□□ 0.88
LAMC1P11047 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LAMC1P11047 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LAMC1P11047 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LAMC1P11047 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LAMC1P11047 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LAMC1P11047 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LAMC1P11047 MIR645-201ENST00000385283 94 ntBASIC20.52■□□□□ 0.88
LAMC1P11047 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LAMC1P11047 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC20.52■□□□□ 0.88
LAMC1P11047 LYPLA2P1-203ENST00000447689 696 ntBASIC20.52■□□□□ 0.88
LAMC1P11047 AC018463.1-201ENST00000456674 917 ntBASIC20.52■□□□□ 0.88
LAMC1P11047 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC20.52■□□□□ 0.88
LAMC1P11047 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LAMC1P11047 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LAMC1P11047 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LAMC1P11047 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC20.52■□□□□ 0.87
LAMC1P11047 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
LAMC1P11047 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LAMC1P11047 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LAMC1P11047 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LAMC1P11047 SERF2-206ENST00000409291 807 ntTSL 3 BASIC20.51■□□□□ 0.87
LAMC1P11047 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC20.51■□□□□ 0.87
LAMC1P11047 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC20.51■□□□□ 0.87
LAMC1P11047 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LAMC1P11047 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC20.51■□□□□ 0.87
LAMC1P11047 POLD4-208ENST00000532830 904 ntTSL 3 BASIC20.51■□□□□ 0.87
LAMC1P11047 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC20.51■□□□□ 0.87
LAMC1P11047 RN7SL665P-201ENST00000578793 300 ntBASIC20.51■□□□□ 0.87
LAMC1P11047 AC007326.1-201ENST00000604539 458 ntBASIC20.51■□□□□ 0.87
LAMC1P11047 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LAMC1P11047 AC090502.4-201ENST00000551714 1386 ntBASIC20.51■□□□□ 0.87
LAMC1P11047 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LAMC1P11047 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LAMC1P11047 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 AC215219.1-201ENST00000400706 1817 ntBASIC20.51■□□□□ 0.87
LAMC1P11047 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LAMC1P11047 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC20.5■□□□□ 0.87
LAMC1P11047 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.5■□□□□ 0.87
LAMC1P11047 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMC1P11047 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMC1P11047 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC20.5■□□□□ 0.87
LAMC1P11047 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC20.5■□□□□ 0.87
LAMC1P11047 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC20.5■□□□□ 0.87
LAMC1P11047 PSMD4P1-201ENST00000433951 1109 ntBASIC20.5■□□□□ 0.87
LAMC1P11047 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LAMC1P11047 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC20.5■□□□□ 0.87
LAMC1P11047 HPD-204ENST00000543163 1709 ntTSL 5 BASIC20.5■□□□□ 0.87
LAMC1P11047 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMC1P11047 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMC1P11047 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMC1P11047 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMC1P11047 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMC1P11047 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMC1P11047 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC20.5■□□□□ 0.87
LAMC1P11047 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.5■□□□□ 0.87
LAMC1P11047 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LAMC1P11047 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms