Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RPSAP31-201ENST00000416648 895 ntBASIC15.28■□□□□ 0.04
RHOP08100 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.28■□□□□ 0.04
RHOP08100 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RHOP08100 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.28■□□□□ 0.04
RHOP08100 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.28■□□□□ 0.04
RHOP08100 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.28■□□□□ 0.04
RHOP08100 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.28■□□□□ 0.04
RHOP08100 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.28■□□□□ 0.04
RHOP08100 MIR4750-201ENST00000584564 56 ntBASIC15.28■□□□□ 0.04
RHOP08100 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.28■□□□□ 0.04
RHOP08100 AC138894.2-201ENST00000602838 371 ntBASIC15.28■□□□□ 0.04
RHOP08100 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.28■□□□□ 0.04
RHOP08100 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.28■□□□□ 0.04
RHOP08100 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RHOP08100 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.28■□□□□ 0.04
RHOP08100 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RHOP08100 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.28■□□□□ 0.04
RHOP08100 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.28■□□□□ 0.04
RHOP08100 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RHOP08100 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.28■□□□□ 0.04
RHOP08100 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RHOP08100 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RHOP08100 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.28■□□□□ 0.04
RHOP08100 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RHOP08100 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.28■□□□□ 0.04
RHOP08100 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RHOP08100 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RHOP08100 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RHOP08100 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RHOP08100 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RHOP08100 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RHOP08100 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.27■□□□□ 0.04
RHOP08100 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RHOP08100 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RHOP08100 ACE3P-201ENST00000423435 1973 ntBASIC15.27■□□□□ 0.04
RHOP08100 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.27■□□□□ 0.04
RHOP08100 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RHOP08100 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RHOP08100 AC009093.10-201ENST00000641956 1442 ntBASIC15.27■□□□□ 0.04
RHOP08100 AC007950.2-201ENST00000615045 2347 ntBASIC15.27■□□□□ 0.04
RHOP08100 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.27■□□□□ 0.04
RHOP08100 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RHOP08100 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RHOP08100 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.27■□□□□ 0.04
RHOP08100 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
RHOP08100 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.27■□□□□ 0.04
RHOP08100 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.27■□□□□ 0.04
RHOP08100 AL583805.1-201ENST00000391389 531 ntBASIC15.27■□□□□ 0.04
RHOP08100 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.27■□□□□ 0.04
RHOP08100 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RHOP08100 RPS9P1-201ENST00000419943 583 ntBASIC15.27■□□□□ 0.04
RHOP08100 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RHOP08100 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.27■□□□□ 0.04
RHOP08100 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RHOP08100 AP000358.1-201ENST00000456260 156 ntBASIC15.27■□□□□ 0.04
RHOP08100 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.27■□□□□ 0.04
RHOP08100 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.27■□□□□ 0.04
RHOP08100 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.27■□□□□ 0.04
RHOP08100 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.27■□□□□ 0.04
RHOP08100 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.27■□□□□ 0.04
RHOP08100 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RHOP08100 AC242376.2-201ENST00000619355 883 ntBASIC15.27■□□□□ 0.04
RHOP08100 YRDCP1-201ENST00000621419 643 ntBASIC15.27■□□□□ 0.04
RHOP08100 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RHOP08100 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RHOP08100 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.27■□□□□ 0.03
RHOP08100 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RHOP08100 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RHOP08100 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.27■□□□□ 0.03
RHOP08100 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.27■□□□□ 0.03
RHOP08100 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RHOP08100 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RHOP08100 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RHOP08100 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RHOP08100 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RHOP08100 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.27■□□□□ 0.03
RHOP08100 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RHOP08100 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RHOP08100 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RHOP08100 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RHOP08100 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.27■□□□□ 0.03
RHOP08100 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RHOP08100 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RHOP08100 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RHOP08100 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RHOP08100 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RHOP08100 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RHOP08100 KRT18P9-201ENST00000604826 1300 ntBASIC15.26■□□□□ 0.03
RHOP08100 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RHOP08100 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RHOP08100 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.26■□□□□ 0.03
RHOP08100 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RHOP08100 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RHOP08100 RNA5SP359-201ENST00000364838 113 ntBASIC15.26■□□□□ 0.03
RHOP08100 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.26■□□□□ 0.03
RHOP08100 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RHOP08100 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RHOP08100 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RHOP08100 BANF1P3-201ENST00000412556 261 ntBASIC15.26■□□□□ 0.03
RHOP08100 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms