Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CAPN1P07384 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CAPN1P07384 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
CAPN1P07384 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.75□□□□□ -0.05
CAPN1P07384 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CAPN1P07384 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.74□□□□□ -0.05
CAPN1P07384 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CAPN1P07384 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CAPN1P07384 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.74□□□□□ -0.05
CAPN1P07384 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
CAPN1P07384 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.74□□□□□ -0.05
CAPN1P07384 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.74□□□□□ -0.05
CAPN1P07384 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.74□□□□□ -0.05
CAPN1P07384 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.74□□□□□ -0.05
CAPN1P07384 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.74□□□□□ -0.05
CAPN1P07384 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.74□□□□□ -0.05
CAPN1P07384 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.74□□□□□ -0.05
CAPN1P07384 TDH-203ENST00000531764 1110 ntBASIC14.74□□□□□ -0.05
CAPN1P07384 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.74□□□□□ -0.05
CAPN1P07384 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CAPN1P07384 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CAPN1P07384 AP005482.1-201ENST00000563722 1273 ntBASIC14.74□□□□□ -0.05
CAPN1P07384 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.74□□□□□ -0.05
CAPN1P07384 CLUHP6-201ENST00000580789 941 ntBASIC14.74□□□□□ -0.05
CAPN1P07384 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.74□□□□□ -0.05
CAPN1P07384 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.74□□□□□ -0.05
CAPN1P07384 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.74□□□□□ -0.05
CAPN1P07384 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 DRD5P1-201ENST00000456605 1438 ntBASIC14.74□□□□□ -0.05
CAPN1P07384 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.74□□□□□ -0.05
CAPN1P07384 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.74□□□□□ -0.05
CAPN1P07384 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CAPN1P07384 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.73□□□□□ -0.05
CAPN1P07384 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.73□□□□□ -0.05
CAPN1P07384 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CAPN1P07384 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.73□□□□□ -0.05
CAPN1P07384 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.73□□□□□ -0.05
CAPN1P07384 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.73□□□□□ -0.05
CAPN1P07384 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CAPN1P07384 BX640514.1-201ENST00000583223 1918 ntBASIC14.73□□□□□ -0.05
CAPN1P07384 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.73□□□□□ -0.05
CAPN1P07384 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CAPN1P07384 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.73□□□□□ -0.05
CAPN1P07384 C1QBPP1-201ENST00000400117 770 ntBASIC14.73□□□□□ -0.05
CAPN1P07384 BOLA2P3-201ENST00000404566 256 ntBASIC14.73□□□□□ -0.05
CAPN1P07384 SOCS2P1-201ENST00000417727 557 ntBASIC14.73□□□□□ -0.05
CAPN1P07384 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CAPN1P07384 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.73□□□□□ -0.05
CAPN1P07384 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.73□□□□□ -0.05
CAPN1P07384 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.73□□□□□ -0.05
CAPN1P07384 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.73□□□□□ -0.05
CAPN1P07384 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 AL158070.2-201ENST00000623713 1621 ntBASIC14.73□□□□□ -0.05
CAPN1P07384 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CAPN1P07384 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.73□□□□□ -0.05
CAPN1P07384 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CAPN1P07384 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.73□□□□□ -0.05
CAPN1P07384 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms