Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.57■□□□□ 0.08
RB1P06400 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.57■□□□□ 0.08
RB1P06400 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.57■□□□□ 0.08
RB1P06400 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.57■□□□□ 0.08
RB1P06400 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.57■□□□□ 0.08
RB1P06400 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.57■□□□□ 0.08
RB1P06400 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.57■□□□□ 0.08
RB1P06400 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.57■□□□□ 0.08
RB1P06400 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.57■□□□□ 0.08
RB1P06400 AL022344.2-201ENST00000568976 968 ntBASIC15.57■□□□□ 0.08
RB1P06400 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.57■□□□□ 0.08
RB1P06400 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.57■□□□□ 0.08
RB1P06400 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.57■□□□□ 0.08
RB1P06400 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.57■□□□□ 0.08
RB1P06400 AP000322.3-201ENST00000608665 388 ntBASIC15.57■□□□□ 0.08
RB1P06400 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.57■□□□□ 0.08
RB1P06400 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.57■□□□□ 0.08
RB1P06400 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.57■□□□□ 0.08
RB1P06400 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.57■□□□□ 0.08
RB1P06400 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.57■□□□□ 0.08
RB1P06400 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RB1P06400 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.56■□□□□ 0.08
RB1P06400 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RB1P06400 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 KRT17P5-201ENST00000332088 839 ntBASIC15.56■□□□□ 0.08
RB1P06400 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.56■□□□□ 0.08
RB1P06400 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.56■□□□□ 0.08
RB1P06400 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.56■□□□□ 0.08
RB1P06400 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.56■□□□□ 0.08
RB1P06400 AL139008.1-201ENST00000437894 228 ntBASIC15.56■□□□□ 0.08
RB1P06400 AC004837.1-201ENST00000446267 564 ntBASIC15.56■□□□□ 0.08
RB1P06400 AC010234.1-201ENST00000494599 870 ntBASIC15.56■□□□□ 0.08
RB1P06400 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.56■□□□□ 0.08
RB1P06400 AC138701.2-201ENST00000553634 226 ntBASIC15.56■□□□□ 0.08
RB1P06400 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.56■□□□□ 0.08
RB1P06400 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
RB1P06400 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC15.56■□□□□ 0.08
RB1P06400 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.56■□□□□ 0.08
RB1P06400 MRPL37P1-201ENST00000592451 1337 ntBASIC15.56■□□□□ 0.08
RB1P06400 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.56■□□□□ 0.08
RB1P06400 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.56■□□□□ 0.08
RB1P06400 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.56■□□□□ 0.08
RB1P06400 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.56■□□□□ 0.08
RB1P06400 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.56■□□□□ 0.08
RB1P06400 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.56■□□□□ 0.08
RB1P06400 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.56■□□□□ 0.08
RB1P06400 PCDHA1-201ENST00000378133 2726 ntBASIC15.56■□□□□ 0.08
RB1P06400 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RB1P06400 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RB1P06400 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RB1P06400 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.55■□□□□ 0.08
RB1P06400 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
RB1P06400 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
RB1P06400 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RB1P06400 LINC02199-201ENST00000506655 2702 ntBASIC15.55■□□□□ 0.08
RB1P06400 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RB1P06400 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.55■□□□□ 0.08
RB1P06400 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RB1P06400 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.55■□□□□ 0.08
RB1P06400 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RB1P06400 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.55■□□□□ 0.08
RB1P06400 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RB1P06400 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RB1P06400 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RB1P06400 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.55■□□□□ 0.08
RB1P06400 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RB1P06400 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.55■□□□□ 0.08
RB1P06400 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.55■□□□□ 0.08
RB1P06400 AL357563.1-201ENST00000404728 395 ntBASIC15.55■□□□□ 0.08
RB1P06400 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.55■□□□□ 0.08
RB1P06400 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.55■□□□□ 0.08
RB1P06400 PSMD4P1-201ENST00000433951 1109 ntBASIC15.55■□□□□ 0.08
RB1P06400 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.55■□□□□ 0.08
RB1P06400 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.55■□□□□ 0.08
RB1P06400 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.55■□□□□ 0.08
RB1P06400 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.55■□□□□ 0.08
RB1P06400 CR383656.3-201ENST00000551315 183 ntBASIC15.55■□□□□ 0.08
RB1P06400 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms