Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 AC136759.1-202ENST00000530858 2194 ntBASIC17.79■□□□□ 0.44
CHGBP05060 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CHGBP05060 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.78■□□□□ 0.44
CHGBP05060 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.78■□□□□ 0.44
CHGBP05060 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHGBP05060 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.78■□□□□ 0.44
CHGBP05060 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 AC139712.1-201ENST00000378256 1875 ntBASIC17.78■□□□□ 0.44
CHGBP05060 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.78■□□□□ 0.44
CHGBP05060 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.78■□□□□ 0.44
CHGBP05060 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CHGBP05060 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.78■□□□□ 0.44
CHGBP05060 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.78■□□□□ 0.44
CHGBP05060 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 AL451050.2-201ENST00000606967 682 ntBASIC17.78■□□□□ 0.44
CHGBP05060 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CHGBP05060 Z98259.2-201ENST00000641583 609 ntBASIC17.78■□□□□ 0.44
CHGBP05060 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CHGBP05060 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHGBP05060 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CHGBP05060 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.78■□□□□ 0.44
CHGBP05060 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHGBP05060 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.78■□□□□ 0.44
CHGBP05060 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHGBP05060 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
CHGBP05060 TMBIM7P-202ENST00000641474 1516 ntBASIC17.77■□□□□ 0.44
CHGBP05060 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.77■□□□□ 0.44
CHGBP05060 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.77■□□□□ 0.44
CHGBP05060 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHGBP05060 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHGBP05060 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHGBP05060 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.77■□□□□ 0.44
CHGBP05060 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.77■□□□□ 0.44
CHGBP05060 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 NKAIN1P1-201ENST00000435754 582 ntBASIC17.77■□□□□ 0.44
CHGBP05060 AL645933.1-201ENST00000440087 609 ntBASIC17.77■□□□□ 0.44
CHGBP05060 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.77■□□□□ 0.44
CHGBP05060 AC099548.2-209ENST00000480264 625 ntBASIC17.77■□□□□ 0.44
CHGBP05060 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.77■□□□□ 0.44
CHGBP05060 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.77■□□□□ 0.44
CHGBP05060 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CHGBP05060 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHGBP05060 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.77■□□□□ 0.43
CHGBP05060 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHGBP05060 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CHGBP05060 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
CHGBP05060 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHGBP05060 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHGBP05060 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHGBP05060 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHGBP05060 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHGBP05060 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms