Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.33■□□□□ 0.2
CD4P01730 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.33■□□□□ 0.2
CD4P01730 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 AL512430.1-201ENST00000392575 860 ntBASIC16.33■□□□□ 0.2
CD4P01730 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.33■□□□□ 0.2
CD4P01730 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.33■□□□□ 0.2
CD4P01730 TLE1P1-201ENST00000422965 589 ntBASIC16.33■□□□□ 0.2
CD4P01730 AL592076.1-201ENST00000424448 303 ntBASIC16.33■□□□□ 0.2
CD4P01730 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.33■□□□□ 0.2
CD4P01730 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CD4P01730 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.33■□□□□ 0.2
CD4P01730 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.33■□□□□ 0.2
CD4P01730 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.33■□□□□ 0.2
CD4P01730 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.33■□□□□ 0.2
CD4P01730 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CD4P01730 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CD4P01730 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.33■□□□□ 0.2
CD4P01730 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CD4P01730 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CD4P01730 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.33■□□□□ 0.2
CD4P01730 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.33■□□□□ 0.2
CD4P01730 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD4P01730 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.32■□□□□ 0.2
CD4P01730 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.32■□□□□ 0.2
CD4P01730 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.32■□□□□ 0.2
CD4P01730 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.32■□□□□ 0.2
CD4P01730 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.32■□□□□ 0.2
CD4P01730 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.32■□□□□ 0.2
CD4P01730 NDUFS6P1-201ENST00000485187 316 ntBASIC16.32■□□□□ 0.2
CD4P01730 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.32■□□□□ 0.2
CD4P01730 IGHV3-37-201ENST00000518544 340 ntBASIC16.32■□□□□ 0.2
CD4P01730 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CD4P01730 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.32■□□□□ 0.2
CD4P01730 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CD4P01730 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.32■□□□□ 0.2
CD4P01730 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.32■□□□□ 0.2
CD4P01730 AC007881.3-201ENST00000608897 607 ntBASIC16.32■□□□□ 0.2
CD4P01730 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.32■□□□□ 0.2
CD4P01730 LINC01783-202ENST00000614408 828 ntBASIC16.32■□□□□ 0.2
CD4P01730 MIR6756-201ENST00000616240 63 ntBASIC16.32■□□□□ 0.2
CD4P01730 BX284668.2-205ENST00000619677 828 ntBASIC16.32■□□□□ 0.2
CD4P01730 AC132872.4-202ENST00000622924 2756 ntBASIC16.32■□□□□ 0.2
CD4P01730 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.32■□□□□ 0.2
CD4P01730 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD4P01730 PPT1-215ENST00000641471 2368 ntBASIC16.31■□□□□ 0.2
CD4P01730 AP000845.1-201ENST00000581677 2131 ntBASIC16.31■□□□□ 0.2
CD4P01730 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD4P01730 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.31■□□□□ 0.2
CD4P01730 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD4P01730 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD4P01730 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.31■□□□□ 0.2
CD4P01730 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD4P01730 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD4P01730 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.31■□□□□ 0.2
CD4P01730 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD4P01730 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CD4P01730 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.31■□□□□ 0.2
CD4P01730 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CD4P01730 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.31■□□□□ 0.2
CD4P01730 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.31■□□□□ 0.2
CD4P01730 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
CD4P01730 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.31■□□□□ 0.2
CD4P01730 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CD4P01730 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms