Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALDH1A1P00352 BRI3P1-201ENST00000440440 378 ntBASIC16.67■□□□□ 0.26
ALDH1A1P00352 ALG1L3P-201ENST00000503331 765 ntBASIC16.67■□□□□ 0.26
ALDH1A1P00352 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 TREHP1-201ENST00000531328 465 ntBASIC16.67■□□□□ 0.26
ALDH1A1P00352 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALDH1A1P00352 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALDH1A1P00352 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALDH1A1P00352 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALDH1A1P00352 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALDH1A1P00352 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALDH1A1P00352 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 FUCA1P1-201ENST00000374476 1351 ntBASIC16.66■□□□□ 0.26
ALDH1A1P00352 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 AC108734.2-201ENST00000420887 1069 ntBASIC16.66■□□□□ 0.26
ALDH1A1P00352 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 RPL3P5-201ENST00000441645 1232 ntBASIC16.66■□□□□ 0.26
ALDH1A1P00352 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 BPIFB5P-201ENST00000457066 1099 ntBASIC16.66■□□□□ 0.26
ALDH1A1P00352 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ALDH1A1P00352 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALDH1A1P00352 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.65■□□□□ 0.26
ALDH1A1P00352 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 AC140658.4-201ENST00000561990 352 ntBASIC16.65■□□□□ 0.26
ALDH1A1P00352 AC008972.2-201ENST00000606587 494 ntBASIC16.65■□□□□ 0.26
ALDH1A1P00352 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ALDH1A1P00352 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALDH1A1P00352 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms