Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1AO95602 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1AO95602 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1AO95602 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC21.05■□□□□ 0.96
POLR1AO95602 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1AO95602 NME4-203ENST00000397722 1232 ntTSL 2 BASIC21.05■□□□□ 0.96
POLR1AO95602 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC21.05■□□□□ 0.96
POLR1AO95602 AC108734.2-201ENST00000420887 1069 ntBASIC21.05■□□□□ 0.96
POLR1AO95602 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC21.05■□□□□ 0.96
POLR1AO95602 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1AO95602 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC21.05■□□□□ 0.96
POLR1AO95602 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
POLR1AO95602 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC21.05■□□□□ 0.96
POLR1AO95602 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC21.05■□□□□ 0.96
POLR1AO95602 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC21.05■□□□□ 0.96
POLR1AO95602 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC21.05■□□□□ 0.96
POLR1AO95602 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
POLR1AO95602 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
POLR1AO95602 AL590440.2-201ENST00000641973 1595 ntBASIC21.05■□□□□ 0.96
POLR1AO95602 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
POLR1AO95602 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1AO95602 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
POLR1AO95602 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1AO95602 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
POLR1AO95602 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1AO95602 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
POLR1AO95602 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1AO95602 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1AO95602 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1AO95602 AHCYP4-201ENST00000419201 1315 ntBASIC21.05■□□□□ 0.96
POLR1AO95602 ENPP7P8-202ENST00000527856 1345 ntBASIC21.05■□□□□ 0.96
POLR1AO95602 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1AO95602 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC21.04■□□□□ 0.96
POLR1AO95602 RBM4-207ENST00000506523 654 ntTSL 3 BASIC21.04■□□□□ 0.96
POLR1AO95602 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC21.04■□□□□ 0.96
POLR1AO95602 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC21.04■□□□□ 0.96
POLR1AO95602 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
POLR1AO95602 SRP14-204ENST00000558720 780 ntTSL 2 BASIC21.04■□□□□ 0.96
POLR1AO95602 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
POLR1AO95602 AC140113.1-201ENST00000603467 169 ntBASIC21.04■□□□□ 0.96
POLR1AO95602 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC21.04■□□□□ 0.96
POLR1AO95602 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC21.04■□□□□ 0.96
POLR1AO95602 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
POLR1AO95602 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC21.04■□□□□ 0.96
POLR1AO95602 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC21.04■□□□□ 0.96
POLR1AO95602 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
POLR1AO95602 KRT18P46-201ENST00000435568 1279 ntBASIC21.04■□□□□ 0.96
POLR1AO95602 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1AO95602 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1AO95602 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
POLR1AO95602 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC21.03■□□□□ 0.96
POLR1AO95602 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1AO95602 AL672207.1-201ENST00000328462 1570 ntBASIC21.03■□□□□ 0.96
POLR1AO95602 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1AO95602 AL137783.1-201ENST00000623494 1896 ntBASIC21.03■□□□□ 0.96
POLR1AO95602 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC21.03■□□□□ 0.96
POLR1AO95602 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC21.03■□□□□ 0.96
POLR1AO95602 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
POLR1AO95602 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC21.03■□□□□ 0.96
POLR1AO95602 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1AO95602 PTPA-215ENST00000432124 567 ntTSL 4 BASIC21.03■□□□□ 0.96
POLR1AO95602 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1AO95602 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC21.03■□□□□ 0.96
POLR1AO95602 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
POLR1AO95602 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
POLR1AO95602 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC21.03■□□□□ 0.96
POLR1AO95602 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
POLR1AO95602 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC21.03■□□□□ 0.96
POLR1AO95602 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1AO95602 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1AO95602 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1AO95602 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1AO95602 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
POLR1AO95602 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1AO95602 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
POLR1AO95602 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1AO95602 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1AO95602 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1AO95602 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1AO95602 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1AO95602 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1AO95602 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms