Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
NKX2-2O95096 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
NKX2-2O95096 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
NKX2-2O95096 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NKX2-2O95096 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX2-2O95096 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 AC090505.1-201ENST00000430515 1834 ntBASIC13.7□□□□□ -0.22
NKX2-2O95096 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.7□□□□□ -0.22
NKX2-2O95096 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.7□□□□□ -0.22
NKX2-2O95096 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NKX2-2O95096 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.7□□□□□ -0.22
NKX2-2O95096 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX2-2O95096 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.7□□□□□ -0.22
NKX2-2O95096 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX2-2O95096 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.7□□□□□ -0.22
NKX2-2O95096 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.7□□□□□ -0.22
NKX2-2O95096 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NKX2-2O95096 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX2-2O95096 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX2-2O95096 MIR4683-201ENST00000579659 81 ntBASIC13.7□□□□□ -0.22
NKX2-2O95096 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.7□□□□□ -0.22
NKX2-2O95096 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.7□□□□□ -0.22
NKX2-2O95096 ZACNP1-201ENST00000612259 710 ntBASIC13.7□□□□□ -0.22
NKX2-2O95096 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.7□□□□□ -0.22
NKX2-2O95096 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX2-2O95096 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX2-2O95096 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX2-2O95096 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NKX2-2O95096 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX2-2O95096 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX2-2O95096 HSPA7-201ENST00000445535 1927 ntBASIC13.7□□□□□ -0.22
NKX2-2O95096 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NKX2-2O95096 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX2-2O95096 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NKX2-2O95096 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX2-2O95096 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX2-2O95096 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NKX2-2O95096 AC215219.1-201ENST00000400706 1817 ntBASIC13.69□□□□□ -0.22
NKX2-2O95096 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX2-2O95096 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NKX2-2O95096 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX2-2O95096 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NKX2-2O95096 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 AC079776.1-201ENST00000401540 1152 ntBASIC13.69□□□□□ -0.22
NKX2-2O95096 AC112492.5-201ENST00000421897 457 ntBASIC13.69□□□□□ -0.22
NKX2-2O95096 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX2-2O95096 U91328.1-201ENST00000437528 223 ntBASIC13.69□□□□□ -0.22
NKX2-2O95096 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.69□□□□□ -0.22
NKX2-2O95096 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.69□□□□□ -0.22
NKX2-2O95096 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX2-2O95096 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
NKX2-2O95096 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.69□□□□□ -0.22
NKX2-2O95096 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.69□□□□□ -0.22
NKX2-2O95096 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX2-2O95096 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 AC079316.1-201ENST00000548397 411 ntBASIC13.69□□□□□ -0.22
NKX2-2O95096 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX2-2O95096 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX2-2O95096 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.69□□□□□ -0.22
NKX2-2O95096 AC008825.2-201ENST00000603374 718 ntBASIC13.69□□□□□ -0.22
NKX2-2O95096 AL512343.1-201ENST00000605837 169 ntBASIC13.69□□□□□ -0.22
NKX2-2O95096 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX2-2O95096 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX2-2O95096 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms