Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GPC4O75487 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.01□□□□□ -0.01
GPC4O75487 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.01□□□□□ -0.01
GPC4O75487 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.01□□□□□ -0.01
GPC4O75487 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 AC098614.1-201ENST00000368528 745 ntBASIC15.01□□□□□ -0.01
GPC4O75487 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.01□□□□□ -0.01
GPC4O75487 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.01□□□□□ -0.01
GPC4O75487 AL162726.2-201ENST00000438986 1017 ntBASIC15.01□□□□□ -0.01
GPC4O75487 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
GPC4O75487 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.01□□□□□ -0.01
GPC4O75487 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.01□□□□□ -0.01
GPC4O75487 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 CLUHP6-201ENST00000580789 941 ntBASIC15.01□□□□□ -0.01
GPC4O75487 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.01□□□□□ -0.01
GPC4O75487 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GPC4O75487 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.01□□□□□ -0.01
GPC4O75487 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.01□□□□□ -0.01
GPC4O75487 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.01□□□□□ -0.01
GPC4O75487 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
GPC4O75487 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.01□□□□□ -0.01
GPC4O75487 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
GPC4O75487 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15□□□□□ -0.01
GPC4O75487 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
GPC4O75487 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
GPC4O75487 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
GPC4O75487 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 ACKR1-201ENST00000368121 1240 ntBASIC15□□□□□ -0.01
GPC4O75487 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15□□□□□ -0.01
GPC4O75487 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15□□□□□ -0.01
GPC4O75487 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15□□□□□ -0.01
GPC4O75487 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
GPC4O75487 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15□□□□□ -0.01
GPC4O75487 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
GPC4O75487 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15□□□□□ -0.01
GPC4O75487 CU634019.7-201ENST00000624153 1185 ntBASIC15□□□□□ -0.01
GPC4O75487 FP236241.2-201ENST00000624906 1185 ntBASIC15□□□□□ -0.01
GPC4O75487 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15□□□□□ -0.01
GPC4O75487 ABBA01031660.1-201ENST00000635219 756 ntBASIC15□□□□□ -0.01
GPC4O75487 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
GPC4O75487 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
GPC4O75487 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15□□□□□ -0.01
GPC4O75487 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15□□□□□ -0.01
GPC4O75487 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15□□□□□ -0.01
GPC4O75487 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
GPC4O75487 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15□□□□□ -0.01
GPC4O75487 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
GPC4O75487 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
GPC4O75487 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15□□□□□ -0.01
GPC4O75487 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
GPC4O75487 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
GPC4O75487 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15□□□□□ -0.01
GPC4O75487 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GPC4O75487 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
GPC4O75487 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
GPC4O75487 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.99□□□□□ -0.01
GPC4O75487 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.99□□□□□ -0.01
GPC4O75487 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 265.8 ms