Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
HCN1O60741 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.02□□□□□ -0.17
HCN1O60741 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
HCN1O60741 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
HCN1O60741 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.02□□□□□ -0.17
HCN1O60741 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.02□□□□□ -0.17
HCN1O60741 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
HCN1O60741 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HCN1O60741 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HCN1O60741 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.01□□□□□ -0.17
HCN1O60741 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.01□□□□□ -0.17
HCN1O60741 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 AC126335.2-201ENST00000623362 4637 ntBASIC14.01□□□□□ -0.17
HCN1O60741 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HCN1O60741 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.01□□□□□ -0.17
HCN1O60741 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HCN1O60741 AC012508.2-201ENST00000567613 1472 ntBASIC14.01□□□□□ -0.17
HCN1O60741 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.01□□□□□ -0.17
HCN1O60741 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.01□□□□□ -0.17
HCN1O60741 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HCN1O60741 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.01□□□□□ -0.17
HCN1O60741 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 RPS2P32-201ENST00000439199 892 ntBASIC14.01□□□□□ -0.17
HCN1O60741 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.01□□□□□ -0.17
HCN1O60741 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 GAPDHP40-201ENST00000505218 1006 ntBASIC14.01□□□□□ -0.17
HCN1O60741 AP001889.1-201ENST00000525414 633 ntBASIC14.01□□□□□ -0.17
HCN1O60741 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.01□□□□□ -0.17
HCN1O60741 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.01□□□□□ -0.17
HCN1O60741 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.01□□□□□ -0.17
HCN1O60741 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.01□□□□□ -0.17
HCN1O60741 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.01□□□□□ -0.17
HCN1O60741 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.01□□□□□ -0.17
HCN1O60741 COX11-210ENST00000639671 696 ntBASIC14.01□□□□□ -0.17
HCN1O60741 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.01□□□□□ -0.17
HCN1O60741 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.01□□□□□ -0.17
HCN1O60741 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.01□□□□□ -0.17
HCN1O60741 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.01□□□□□ -0.17
HCN1O60741 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.01□□□□□ -0.17
HCN1O60741 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HCN1O60741 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.01□□□□□ -0.17
HCN1O60741 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HCN1O60741 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HCN1O60741 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 AP000845.1-201ENST00000581677 2131 ntBASIC14□□□□□ -0.17
HCN1O60741 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14□□□□□ -0.17
HCN1O60741 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14□□□□□ -0.17
HCN1O60741 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14□□□□□ -0.17
HCN1O60741 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14□□□□□ -0.17
HCN1O60741 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
HCN1O60741 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14□□□□□ -0.17
HCN1O60741 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
HCN1O60741 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HCN1O60741 AC134312.5-201ENST00000568031 1313 ntBASIC14□□□□□ -0.17
HCN1O60741 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14□□□□□ -0.17
HCN1O60741 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14□□□□□ -0.17
HCN1O60741 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14□□□□□ -0.17
HCN1O60741 AC007274.1-201ENST00000439805 662 ntBASIC14□□□□□ -0.17
HCN1O60741 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14□□□□□ -0.17
HCN1O60741 KRT223P-202ENST00000449164 1292 ntBASIC14□□□□□ -0.17
HCN1O60741 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14□□□□□ -0.17
HCN1O60741 CROCCP4-201ENST00000457096 498 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms