Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.14■□□□□ 0.01
RIPK2O43353 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RIPK2O43353 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.14■□□□□ 0.01
RIPK2O43353 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.14■□□□□ 0.01
RIPK2O43353 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RIPK2O43353 DNAJB3-201ENST00000446806 729 ntBASIC15.14■□□□□ 0.01
RIPK2O43353 AC026410.3-201ENST00000514280 936 ntBASIC15.14■□□□□ 0.01
RIPK2O43353 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RIPK2O43353 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.14■□□□□ 0.01
RIPK2O43353 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.14■□□□□ 0.01
RIPK2O43353 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.14■□□□□ 0.01
RIPK2O43353 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.14■□□□□ 0.01
RIPK2O43353 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RIPK2O43353 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RIPK2O43353 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.14■□□□□ 0.01
RIPK2O43353 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.14■□□□□ 0.01
RIPK2O43353 AGAP10P-201ENST00000454844 2418 ntBASIC15.14■□□□□ 0.01
RIPK2O43353 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.14■□□□□ 0.01
RIPK2O43353 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.14■□□□□ 0.01
RIPK2O43353 KRT8P35-201ENST00000483942 1338 ntBASIC15.14■□□□□ 0.01
RIPK2O43353 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RIPK2O43353 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RIPK2O43353 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RIPK2O43353 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
RIPK2O43353 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.13■□□□□ 0.01
RIPK2O43353 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 AL139400.1-201ENST00000366220 510 ntBASIC15.13■□□□□ 0.01
RIPK2O43353 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.13■□□□□ 0.01
RIPK2O43353 AC004945.1-201ENST00000416738 983 ntBASIC15.13■□□□□ 0.01
RIPK2O43353 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.13■□□□□ 0.01
RIPK2O43353 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.13■□□□□ 0.01
RIPK2O43353 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.13■□□□□ 0.01
RIPK2O43353 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.13■□□□□ 0.01
RIPK2O43353 ZNF890P-202ENST00000530367 1156 ntBASIC15.13■□□□□ 0.01
RIPK2O43353 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RIPK2O43353 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.13■□□□□ 0.01
RIPK2O43353 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.13■□□□□ 0.01
RIPK2O43353 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RIPK2O43353 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.13■□□□□ 0.01
RIPK2O43353 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RIPK2O43353 PRSS30P-206ENST00000641773 873 ntBASIC15.13■□□□□ 0.01
RIPK2O43353 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.13■□□□□ 0.01
RIPK2O43353 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
RIPK2O43353 SALL4P5-201ENST00000419001 1760 ntBASIC15.13■□□□□ 0.01
RIPK2O43353 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RIPK2O43353 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RIPK2O43353 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RIPK2O43353 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RIPK2O43353 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 AL136172.1-201ENST00000598590 1394 ntBASIC15.12■□□□□ 0.01
RIPK2O43353 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.12■□□□□ 0.01
RIPK2O43353 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.12■□□□□ 0.01
RIPK2O43353 AC005562.1-201ENST00000583030 3219 ntBASIC15.12■□□□□ 0.01
RIPK2O43353 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RIPK2O43353 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RIPK2O43353 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
RIPK2O43353 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.12■□□□□ 0.01
RIPK2O43353 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RIPK2O43353 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RIPK2O43353 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms