Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD2O14647 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD2O14647 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 AC027612.2-202ENST00000445955 1199 ntBASIC19.93■□□□□ 0.78
CHD2O14647 KRT18P62-201ENST00000446618 1287 ntBASIC19.93■□□□□ 0.78
CHD2O14647 RN7SL375P-201ENST00000492442 298 ntBASIC19.93■□□□□ 0.78
CHD2O14647 BCL2L12P1-201ENST00000508390 733 ntBASIC19.93■□□□□ 0.78
CHD2O14647 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC19.93■□□□□ 0.78
CHD2O14647 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD2O14647 AC026336.4-201ENST00000624565 1050 ntBASIC19.93■□□□□ 0.78
CHD2O14647 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CHD2O14647 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHD2O14647 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHD2O14647 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CHD2O14647 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHD2O14647 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHD2O14647 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.93■□□□□ 0.78
CHD2O14647 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.93■□□□□ 0.78
CHD2O14647 NHP2P1-201ENST00000335274 462 ntBASIC19.92■□□□□ 0.78
CHD2O14647 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CHD2O14647 ZNF877P-201ENST00000437614 612 ntBASIC19.92■□□□□ 0.78
CHD2O14647 SLC25A15P3-201ENST00000505530 290 ntBASIC19.92■□□□□ 0.78
CHD2O14647 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD2O14647 CTBP2P6-201ENST00000526402 1229 ntBASIC19.92■□□□□ 0.78
CHD2O14647 SORD2P-201ENST00000558556 1069 ntBASIC19.92■□□□□ 0.78
CHD2O14647 AC005586.2-201ENST00000563946 837 ntBASIC19.92■□□□□ 0.78
CHD2O14647 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC19.92■□□□□ 0.78
CHD2O14647 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC19.92■□□□□ 0.78
CHD2O14647 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC19.92■□□□□ 0.78
CHD2O14647 URAHP-205ENST00000610227 398 ntBASIC19.92■□□□□ 0.78
CHD2O14647 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD2O14647 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD2O14647 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CHD2O14647 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC19.92■□□□□ 0.78
CHD2O14647 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CHD2O14647 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC19.92■□□□□ 0.78
CHD2O14647 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC19.92■□□□□ 0.78
CHD2O14647 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC19.92■□□□□ 0.78
CHD2O14647 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC19.92■□□□□ 0.78
CHD2O14647 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CHD2O14647 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD2O14647 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
CHD2O14647 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC19.91■□□□□ 0.78
CHD2O14647 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.91■□□□□ 0.78
CHD2O14647 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHD2O14647 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC19.91■□□□□ 0.78
CHD2O14647 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC19.91■□□□□ 0.78
CHD2O14647 MED11-202ENST00000573708 802 ntTSL 2 BASIC19.91■□□□□ 0.78
CHD2O14647 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC19.91■□□□□ 0.78
CHD2O14647 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHD2O14647 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC19.91■□□□□ 0.78
CHD2O14647 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.91■□□□□ 0.78
CHD2O14647 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD2O14647 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD2O14647 DOC2GP-204ENST00000639052 2548 ntBASIC19.91■□□□□ 0.78
CHD2O14647 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD2O14647 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.91■□□□□ 0.78
CHD2O14647 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD2O14647 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHD2O14647 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHD2O14647 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD2O14647 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CHD2O14647 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CHD2O14647 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD2O14647 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD2O14647 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHD2O14647 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC19.9■□□□□ 0.78
CHD2O14647 HNRNPA1P16-201ENST00000575692 955 ntBASIC19.9■□□□□ 0.78
CHD2O14647 MIR4746-201ENST00000579802 71 ntBASIC19.9■□□□□ 0.78
CHD2O14647 AC080013.5-201ENST00000607044 679 ntBASIC19.9■□□□□ 0.78
CHD2O14647 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHD2O14647 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CHD2O14647 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD2O14647 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD2O14647 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHD2O14647 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC19.9■□□□□ 0.78
CHD2O14647 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD2O14647 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms