Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXN3O00409 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXN3O00409 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
FOXN3O00409 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXN3O00409 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
FOXN3O00409 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
FOXN3O00409 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
FOXN3O00409 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXN3O00409 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXN3O00409 AC006504.5-208ENST00000588784 2401 ntBASIC15.92■□□□□ 0.14
FOXN3O00409 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 TPM3P8-201ENST00000330554 643 ntBASIC15.92■□□□□ 0.14
FOXN3O00409 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.92■□□□□ 0.14
FOXN3O00409 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXN3O00409 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXN3O00409 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
FOXN3O00409 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.92■□□□□ 0.14
FOXN3O00409 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.92■□□□□ 0.14
FOXN3O00409 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.92■□□□□ 0.14
FOXN3O00409 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
FOXN3O00409 ECM1P1-201ENST00000604092 1279 ntBASIC15.92■□□□□ 0.14
FOXN3O00409 BX088702.1-201ENST00000610784 235 ntBASIC15.92■□□□□ 0.14
FOXN3O00409 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.92■□□□□ 0.14
FOXN3O00409 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.92■□□□□ 0.14
FOXN3O00409 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXN3O00409 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
FOXN3O00409 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXN3O00409 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
FOXN3O00409 AC215219.1-201ENST00000400706 1817 ntBASIC15.91■□□□□ 0.14
FOXN3O00409 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
FOXN3O00409 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.91■□□□□ 0.14
FOXN3O00409 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXN3O00409 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
FOXN3O00409 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
FOXN3O00409 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 AL512384.1-201ENST00000406683 331 ntBASIC15.91■□□□□ 0.14
FOXN3O00409 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
FOXN3O00409 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXN3O00409 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.91■□□□□ 0.14
FOXN3O00409 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
FOXN3O00409 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
FOXN3O00409 AC103988.2-201ENST00000561804 725 ntBASIC15.91■□□□□ 0.14
FOXN3O00409 MIR3197-201ENST00000582241 73 ntBASIC15.91■□□□□ 0.14
FOXN3O00409 AC015936.2-201ENST00000593177 259 ntBASIC15.91■□□□□ 0.14
FOXN3O00409 IGHV3-72-202ENST00000621503 303 ntBASIC15.91■□□□□ 0.14
FOXN3O00409 AP001002.3-201ENST00000623482 206 ntBASIC15.91■□□□□ 0.14
FOXN3O00409 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 AP000593.2-201ENST00000542775 1433 ntBASIC15.91■□□□□ 0.14
FOXN3O00409 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXN3O00409 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
FOXN3O00409 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXN3O00409 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
FOXN3O00409 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXN3O00409 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
FOXN3O00409 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXN3O00409 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXN3O00409 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXN3O00409 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXN3O00409 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXN3O00409 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXN3O00409 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXN3O00409 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXN3O00409 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
FOXN3O00409 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.9■□□□□ 0.14
FOXN3O00409 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXN3O00409 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXN3O00409 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXN3O00409 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms