Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 IGHV3-72-202ENST00000621503 303 ntBASIC13.13□□□□□ -0.31
NPIPB4C9JG80 AC138951.2-201ENST00000623455 1161 ntBASIC13.13□□□□□ -0.31
NPIPB4C9JG80 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 BEND3P1-201ENST00000421591 1944 ntBASIC13.13□□□□□ -0.31
NPIPB4C9JG80 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPB4C9JG80 AC064801.2-201ENST00000625052 1303 ntBASIC13.13□□□□□ -0.31
NPIPB4C9JG80 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AC010141.1-201ENST00000411585 623 ntBASIC13.12□□□□□ -0.31
NPIPB4C9JG80 NME2P1-201ENST00000426182 414 ntBASIC13.12□□□□□ -0.31
NPIPB4C9JG80 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AL355994.2-201ENST00000447882 704 ntBASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AL590640.2-201ENST00000457038 527 ntBASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AC007551.1-201ENST00000457394 519 ntBASIC13.12□□□□□ -0.31
NPIPB4C9JG80 COX5BP1-201ENST00000507622 393 ntBASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AP005018.1-201ENST00000525475 301 ntBASIC13.12□□□□□ -0.31
NPIPB4C9JG80 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AC078819.1-201ENST00000547454 765 ntBASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AC012085.1-201ENST00000548270 765 ntBASIC13.12□□□□□ -0.31
NPIPB4C9JG80 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 CR383656.12-201ENST00000549567 513 ntBASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 C2orf69P2-201ENST00000562032 1123 ntBASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AC073413.1-201ENST00000603927 732 ntBASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 SNX18-202ENST00000343017 3140 ntBASIC13.12□□□□□ -0.31
NPIPB4C9JG80 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NPIPB4C9JG80 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AC006504.5-208ENST00000588784 2401 ntBASIC13.11□□□□□ -0.31
NPIPB4C9JG80 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms