Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 AL589739.1-201ENST00000607720 493 ntBASIC16.26■□□□□ 0.19
CCDC66A2RUB6 AP001059.3-201ENST00000619053 235 ntBASIC16.26■□□□□ 0.19
CCDC66A2RUB6 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 BEND3P3-201ENST00000611030 2440 ntBASIC16.25■□□□□ 0.19
CCDC66A2RUB6 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 AL080243.2-201ENST00000418783 582 ntBASIC16.25■□□□□ 0.19
CCDC66A2RUB6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 AC025048.3-201ENST00000590609 569 ntBASIC16.25■□□□□ 0.19
CCDC66A2RUB6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 AC005702.4-201ENST00000618393 416 ntBASIC16.25■□□□□ 0.19
CCDC66A2RUB6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC66A2RUB6 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC66A2RUB6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms