Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 AL136172.1-201ENST00000598590 1394 ntBASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 TUBB8P4-201ENST00000511806 1324 ntBASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 RPL37AP1-201ENST00000412502 279 ntBASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 MKNK2P1-201ENST00000437526 628 ntBASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 RBPMS2P1-201ENST00000437762 623 ntBASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 AC009078.2-202ENST00000463353 338 ntBASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 AL512361.1-201ENST00000554200 418 ntBASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 MIR4453-201ENST00000584019 89 ntBASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 C20orf181-201ENST00000623918 480 ntBASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRBV3S1A0A5B6 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 IL9RP2-201ENST00000423948 1312 ntBASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms