Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC106827.1-201ENST00000366454 431 ntBASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 AC092862.1-201ENST00000541534 533 ntBASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 AC091769.1-201ENST00000619576 568 ntBASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 ALG1L7P-201ENST00000502317 768 ntBASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 RBM4-207ENST00000506523 654 ntTSL 3 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 ABHD17AP9-201ENST00000561925 548 ntBASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 MIR566-201ENST00000385187 94 ntBASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC21.72■■□□□ 1.07
CDC42BPBQ9Y5S2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 ZNF436-AS1-201ENST00000335648 2547 ntBASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 SAT1-201ENST00000379251 801 ntTSL 2 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 SAT1-202ENST00000379253 909 ntTSL 2 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 SAT1-203ENST00000379254 868 ntTSL 3 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 CISD2-202ENST00000503643 808 ntTSL 2 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 AL139339.2-201ENST00000608063 657 ntBASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 PDXDC2P-206ENST00000534700 1315 ntBASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPBQ9Y5S2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDC42BPBQ9Y5S2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
CDC42BPBQ9Y5S2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 CYP4F36P-201ENST00000589193 186 ntBASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 LINC00115-201ENST00000473798 1317 ntBASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 MYADML-201ENST00000474610 2147 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms