Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.26□□□□□ -0.45
RCL1Q9Y2P8 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RCL1Q9Y2P8 FAM90A12P-201ENST00000519497 2375 ntBASIC12.26□□□□□ -0.45
RCL1Q9Y2P8 FAM90A24P-201ENST00000520792 2369 ntBASIC12.26□□□□□ -0.45
RCL1Q9Y2P8 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RCL1Q9Y2P8 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RCL1Q9Y2P8 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RCL1Q9Y2P8 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RCL1Q9Y2P8 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RCL1Q9Y2P8 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RCL1Q9Y2P8 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RCL1Q9Y2P8 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 AC015909.5-201ENST00000624336 2266 ntBASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 KRT8P48-201ENST00000515599 1220 ntBASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 AP001005.1-201ENST00000571755 1248 ntBASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 AC092902.6-201ENST00000641783 218 ntBASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 AC104109.2-201ENST00000602919 1418 ntBASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 AL591122.2-201ENST00000624125 1853 ntBASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 AL157414.3-201ENST00000624276 1954 ntBASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.25□□□□□ -0.45
RCL1Q9Y2P8 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms