Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC19.88■□□□□ 0.77
PHF8Q9UPP1 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 ELP5-212ENST00000574255 671 ntTSL 2 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 AC006213.4-201ENST00000616184 634 ntBASIC19.88■□□□□ 0.77
PHF8Q9UPP1 ETV2-207ENST00000619399 994 ntTSL 5 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 BRD7P5-201ENST00000299197 1822 ntBASIC19.88■□□□□ 0.77
PHF8Q9UPP1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PHF8Q9UPP1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 TEKT4P2-202ENST00000559466 1312 ntBASIC19.87■□□□□ 0.77
PHF8Q9UPP1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 SIGLEC22P-201ENST00000599104 714 ntBASIC19.87■□□□□ 0.77
PHF8Q9UPP1 AL591471.1-201ENST00000621855 229 ntBASIC19.87■□□□□ 0.77
PHF8Q9UPP1 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 AC136621.1-201ENST00000624017 2304 ntBASIC19.87■□□□□ 0.77
PHF8Q9UPP1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHF8Q9UPP1 AC021305.1-201ENST00000520656 1514 ntBASIC19.86■□□□□ 0.77
PHF8Q9UPP1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 CELP-201ENST00000411440 1249 ntTSL 5 BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 FAU-202ENST00000434372 533 ntTSL 2 BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 RGS5-216ENST00000449680 788 ntTSL 3 BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 PPIA-208ENST00000489459 907 ntTSL 2 BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHF8Q9UPP1 AL118516.1-201ENST00000564152 670 ntBASIC19.86■□□□□ 0.77
PHF8Q9UPP1 AC132872.1-201ENST00000566986 1195 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms