Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 AC005695.3-201ENST00000614522 232 ntBASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 AL008638.5-201ENST00000623814 1298 ntBASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA1Q9UND3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 FAM8A4P-201ENST00000435433 1213 ntBASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 AC084346.2-201ENST00000607097 949 ntBASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 AL139099.5-201ENST00000635274 300 ntBASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 KRT8P14-201ENST00000414254 1442 ntBASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NPIPA1Q9UND3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms