Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 AC103810.3-201ENST00000583567 96 ntBASIC14.03□□□□□ -0.16
CTSFQ9UBX1 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 AGAP7P-201ENST00000582299 2062 ntBASIC14.02□□□□□ -0.16
CTSFQ9UBX1 AGAP14-201ENST00000624701 2060 ntBASIC14.02□□□□□ -0.16
CTSFQ9UBX1 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 SHC1P1-201ENST00000425230 1745 ntBASIC14.02□□□□□ -0.16
CTSFQ9UBX1 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.02□□□□□ -0.16
CTSFQ9UBX1 E2F3P2-201ENST00000447755 1422 ntBASIC14.02□□□□□ -0.16
CTSFQ9UBX1 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 AC126915.1-201ENST00000522847 1038 ntBASIC14.02□□□□□ -0.17
CTSFQ9UBX1 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 MIR4783-201ENST00000580343 82 ntBASIC14.02□□□□□ -0.17
CTSFQ9UBX1 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 LINC00528-201ENST00000600723 2160 ntBASIC14.02□□□□□ -0.17
CTSFQ9UBX1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSFQ9UBX1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms