Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AL583805.1-201ENST00000391389 531 ntBASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AL512430.1-201ENST00000392575 860 ntBASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 RPSAP31-201ENST00000416648 895 ntBASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 RPS9P1-201ENST00000419943 583 ntBASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AC135983.4-201ENST00000564116 1262 ntBASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AC242376.2-201ENST00000619355 883 ntBASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1R1Q9NWW0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 RNA5SP359-201ENST00000364838 113 ntBASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 TSPY25P-201ENST00000429463 745 ntBASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 OR2R1P-201ENST00000441404 914 ntBASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 AP000358.1-201ENST00000456260 156 ntBASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 AC007881.3-201ENST00000608897 607 ntBASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1R1Q9NWW0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCFC1R1Q9NWW0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
HCFC1R1Q9NWW0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCFC1R1Q9NWW0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCFC1R1Q9NWW0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCFC1R1Q9NWW0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.29■□□□□ 0.04
HCFC1R1Q9NWW0 AC092135.3-201ENST00000624151 1846 ntBASIC15.29■□□□□ 0.04
HCFC1R1Q9NWW0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms